Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 5.6e-127 457.6 230 100.0
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 2.1e-97 359.4 228 81.6
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 6.7e-96 354.4 228 81.1
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 8.5e-91 337.4 230 75.7
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.4e-90 336.7 230 75.7
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 5.5e-90 334.7 232 75.4
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 7.2e-90 334.3 232 75.4
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 9.4e-90 334.0 232 75.0
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 2.1e-89 332.8 235 75.3
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 4.7e-89 331.6 231 75.8
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 1.0e-88 330.5 235 75.3
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 1.0e-88 330.5 235 75.3
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 2.3e-88 329.3 238 72.7
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 2.0e-87 326.2 232 73.7
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 3.3e-87 325.5 239 71.5
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 3.3e-87 325.5 203 80.8
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 2.8e-86 322.4 233 72.5
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 4.8e-86 321.6 234 70.9
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 8.2e-86 320.9 222 72.1
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.1e-85 320.5 230 72.2
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 2.4e-85 319.3 236 70.3
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 4.1e-85 318.5 228 71.5
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 5.3e-85 318.2 231 70.6
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 9.1e-85 317.4 231 71.9
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 1.6e-84 316.6 230 71.3
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 1.6e-84 316.6 236 69.9
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 2.0e-84 316.2 230 72.6
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 1.0e-83 313.9 231 69.7
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 1.7e-83 313.2 235 68.5
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 1.7e-83 313.2 227 70.9
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 2.2e-83 312.8 226 71.7
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 2.2e-83 312.8 229 69.9
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 2.9e-83 312.4 241 68.5
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 3.8e-83 312.0 229 71.2
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 5.0e-83 311.6 237 69.2
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 8.5e-83 310.8 232 69.4
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 1.1e-82 310.5 227 69.6
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 1.5e-82 310.1 241 67.6
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 1.9e-82 309.7 228 70.2
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 3.2e-82 308.9 229 68.1
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 9.4e-82 307.4 233 71.2
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 1.6e-81 306.6 222 69.8
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 2.7e-81 305.8 225 70.7
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 4.7e-81 305.1 226 69.9
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 1.4e-80 303.5 240 66.2
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 3.0e-80 302.4 214 69.6
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 4.0e-80 302.0 227 67.8
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 6.7e-80 301.2 226 67.7
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 6.7e-80 301.2 226 67.7
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 6.7e-80 301.2 233 70.0
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 8.8e-80 300.8 227 67.8
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 4.4e-79 298.5 236 66.5
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 5.7e-79 298.1 230 67.0
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 9.7e-79 297.4 227 70.0
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.7e-78 296.6 218 68.3
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.2e-78 296.2 218 68.3
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 4.8e-78 295.0 227 67.8
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 4.8e-78 295.0 227 68.7
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 6.3e-78 294.7 231 66.2
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 6.3e-78 294.7 226 67.3
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 6.3e-78 294.7 226 67.3
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 6.3e-78 294.7 227 69.2
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 6.3e-78 294.7 228 67.5
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 6.3e-78 294.7 228 66.2
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 8.2e-78 294.3 226 67.3
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 8.2e-78 294.3 227 67.8
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 8.2e-78 294.3 232 65.5
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 1.4e-77 293.5 221 69.7
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.4e-77 293.5 236 63.6
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 1.8e-77 293.1 189 75.1
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 1.8e-77 293.1 214 67.3
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 2.4e-77 292.7 228 67.5
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 3.1e-77 292.4 237 63.3
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 4.1e-77 292.0 227 67.4
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 5.3e-77 291.6 227 67.0
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.2e-76 290.4 227 67.0
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 2.0e-76 289.7 189 74.6
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 3.5e-76 288.9 227 67.0
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 5.9e-76 288.1 227 67.0
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 3.8e-75 285.4 218 68.8
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 3.8e-75 285.4 226 66.4
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 3.8e-75 285.4 236 64.4
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 6.5e-75 284.6 225 65.3
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 8.5e-75 284.3 227 66.5
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.1e-74 283.9 182 74.2
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 1.1e-74 283.9 235 63.8
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 7.2e-74 281.2 217 67.3
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 2.7e-73 279.3 227 65.6
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.6e-73 278.9 230 63.5
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 6.1e-73 278.1 222 64.9
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 8.0e-73 277.7 235 66.4
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 1.4e-72 276.9 226 63.3
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 8.3e-70 267.7 226 62.4
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 1.4e-69 266.9 211 64.0
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 9.1e-69 264.2 221 60.6
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 5.9e-68 261.5 181 69.6
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 8.6e-67 257.7 229 59.0
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 2.5e-66 256.1 199 63.3
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 3.3e-66 255.8 228 58.3
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 1.2e-65 253.8 228 64.5
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 6.1e-65 251.5 176 70.5
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 3.4e-63 245.7 187 64.7
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 9.8e-63 244.2 224 58.0
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.3e-62 243.8 179 65.4
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 3.7e-62 242.3 224 58.5
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 2.7e-60 236.1 179 64.8
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 2.8e-57 226.1 173 69.9
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.8e-56 223.4 134 77.6
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 5.2e-56 221.9 145 71.7
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 8.9e-48 194.5 146 63.0
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.5e-47 193.7 146 62.3
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 4.4e-47 192.2 147 61.2
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 5.8e-47 191.8 147 60.5
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 1.3e-46 190.7 147 60.5
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 2.9e-46 189.5 146 61.0
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 3.7e-46 189.1 146 59.6
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 4.9e-46 188.7 147 59.9
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 4.9e-46 188.7 165 56.4
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 4.9e-46 188.7 147 59.9
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 4.9e-46 188.7 147 59.9
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 6.4e-46 188.3 147 59.9
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 6.4e-46 188.3 147 59.9
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 6.4e-46 188.3 228 52.6
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 1.9e-45 186.8 150 58.7
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.9e-45 186.8 146 59.6
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 2.1e-44 183.3 185 50.8
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 1.3e-43 180.6 169 52.7
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 3.4e-39 166.0 161 51.6
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 5.8e-39 165.2 102 78.4
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 2.2e-38 163.3 161 51.6
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 1.3e-35 154.1 103 69.9
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 4.7e-33 145.6 105 65.7
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 8.9e-32 141.4 186 41.4
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 7.6e-31 138.3 186 44.1
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 2.9e-30 136.3 88 75.0
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 2.4e-29 133.3 131 54.2
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 1.6e-28 130.6 134 59.7
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 3.5e-28 129.4 199 40.2
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 4.6e-28 129.0 187 39.6
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 8.1e-25 118.2 187 40.1
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 5.3e-24 115.5 229 37.6
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 2.0e-23 113.6 203 33.5
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 1.3e-22 110.9 198 33.8
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 1.3e-22 110.9 200 33.0
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 4.6e-20 102.4 101 52.5
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 5.1e-19 99.0 71 63.4
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 3.6e-17 92.8 59 76.3
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 6.9e-16 88.6 101 55.4
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.0e-15 87.0 113 39.8
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.7e-09 66.2 84 39.3
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.7e-09 66.2 84 39.3
Hma1.2p1_1893F.1_g306730 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 1.4e-08 64.3 59 52.5
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 1.8e-08 63.9 48 62.5


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