Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 1.9e-104 382.5 194 100.0
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 2.4e-78 295.8 182 82.4
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 6.5e-76 287.7 188 78.7
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 3.1e-70 268.9 178 77.0
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 2.7e-69 265.8 187 73.8
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 2.7e-69 265.8 189 74.6
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 6.5e-68 261.2 182 73.6
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 6.5e-68 261.2 190 73.2
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 6.5e-68 261.2 185 74.6
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.1e-67 260.4 188 73.4
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 1.6e-66 256.5 152 82.2
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 4.7e-66 255.0 173 74.0
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 8.0e-66 254.2 189 69.3
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 2.3e-65 252.7 188 69.1
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 3.0e-65 252.3 179 73.2
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 3.0e-65 252.3 191 68.6
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 8.8e-65 250.8 156 78.2
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.2e-64 250.4 180 72.8
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 1.2e-64 250.4 183 70.5
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.5e-64 250.0 180 72.2
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 2.0e-64 249.6 177 74.6
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 2.0e-64 249.6 188 69.1
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 3.4e-64 248.8 190 67.4
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 4.4e-64 248.4 187 67.4
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 5.7e-64 248.1 184 69.0
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 5.7e-64 248.1 153 78.4
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 5.7e-64 248.1 153 78.4
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.7e-64 248.1 190 67.9
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 2.2e-63 246.1 179 69.8
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.4e-62 243.4 192 66.7
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 1.4e-62 243.4 198 65.2
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 1.8e-62 243.0 166 71.7
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.8e-62 243.0 188 66.0
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 2.4e-62 242.7 181 68.0
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 4.1e-62 241.9 185 68.6
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 5.4e-62 241.5 193 66.8
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.6e-61 240.0 145 79.3
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 2.0e-61 239.6 182 68.1
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.0e-61 239.6 145 79.3
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 3.5e-61 238.8 179 69.3
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.9e-61 238.0 188 65.4
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 7.7e-61 237.7 187 64.2
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 7.7e-61 237.7 188 69.1
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 7.7e-61 237.7 181 66.9
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.0e-60 237.3 182 67.0
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 1.0e-60 237.3 178 70.2
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 2.2e-60 236.1 198 62.1
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 3.8e-60 235.3 182 65.9
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.1e-59 233.8 180 66.1
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.1e-59 233.8 180 66.1
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.1e-59 233.8 150 75.3
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.1e-59 233.8 143 80.4
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.5e-59 233.4 180 66.1
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.9e-59 233.0 182 67.0
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.5e-59 232.6 180 65.6
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 3.2e-59 232.3 182 66.5
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 5.5e-59 231.5 172 66.9
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 7.2e-59 231.1 180 67.2
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 9.4e-59 230.7 185 63.8
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.2e-58 230.3 181 66.3
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.6e-58 229.9 180 65.0
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 2.1e-58 229.6 186 62.4
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.7e-58 229.2 190 66.3
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 4.7e-58 228.4 185 62.2
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 8.0e-58 227.6 151 72.2
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.4e-57 226.9 180 62.2
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 2.3e-57 226.1 186 60.2
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 3.0e-57 225.7 153 71.2
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 5.2e-57 224.9 184 61.4
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 5.2e-57 224.9 181 63.0
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 6.8e-57 224.6 186 59.7
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 3.4e-56 222.2 177 61.6
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 4.4e-56 221.9 189 60.8
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 4.4e-56 221.9 177 62.7
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 4.4e-56 221.9 174 66.7
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 6.3e-55 218.0 172 64.5
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.1e-54 217.2 177 62.1
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 2.4e-54 216.1 155 70.3
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 2.0e-53 213.0 147 70.1
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 4.5e-53 211.8 152 74.3
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 5.9e-53 211.5 185 61.1
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 5.0e-52 208.4 207 58.0
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.5e-51 206.8 213 55.4
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 3.3e-51 205.7 131 74.8
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 1.8e-49 199.9 151 68.2
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 5.2e-49 198.4 186 57.5
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 7.5e-48 194.5 146 67.8
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.8e-46 189.9 142 70.4
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 3.0e-44 182.6 143 65.7
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 5.8e-40 168.3 154 53.2
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 5.8e-40 168.3 154 53.2
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 3.7e-39 165.6 152 59.2
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.9e-38 163.3 119 67.2
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 2.4e-38 162.9 148 51.4
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 6.0e-37 158.3 89 86.5
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 6.8e-33 144.8 149 47.0
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 2.1e-29 133.3 154 43.5
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 7.3e-27 124.8 122 54.1
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 3.4e-24 115.9 113 54.0
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 5.4e-22 108.6 181 34.8
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 3.5e-21 105.9 66 77.3
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.8e-18 96.3 194 41.8
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 1.8e-17 93.6 146 31.5
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.0e-17 92.4 186 37.6
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.8e-15 85.9 90 52.2
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 3.5e-13 79.3 154 31.8
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 1.5e-11 73.9 144 29.9
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 1.5e-11 73.9 50 72.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.1e-09 67.8 44 72.7
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 1.2e-08 64.3 39 79.5
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.5e-08 62.4 78 53.8
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 3.8e-07 59.3 32 84.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.9e-06 57.0 49 44.9
CDE02G0641 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 9.3e-06 54.7 54 53.7


User provided reference genes

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