Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.9e-44 182.2 95 100.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.8e-40 168.3 95 90.5
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.3e-40 167.2 95 91.6
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 4.1e-39 164.5 93 90.3
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 9.1e-39 163.3 95 88.4
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.5e-38 162.5 95 88.4
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 2.6e-38 161.8 94 90.4
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 5.9e-38 160.6 95 87.4
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 7.7e-38 160.2 95 86.3
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.3e-37 159.5 93 88.2
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.3e-37 159.5 95 90.5
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 2.2e-37 158.7 95 85.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 2.9e-37 158.3 93 88.2
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 3.8e-37 157.9 93 86.0
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 86.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 5.0e-37 157.5 94 84.0
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 6.5e-37 157.1 95 84.2
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 6.5e-37 157.1 95 86.3
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 6.5e-37 157.1 95 84.2
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 8.5e-37 156.8 94 87.2
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.1e-36 156.4 95 90.5
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 1.9e-36 155.6 94 86.2
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.9e-36 155.6 94 86.2
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.9e-36 155.6 93 87.1
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.5e-36 155.2 89 88.8
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 3.2e-36 154.8 96 84.4
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 3.2e-36 154.8 86 93.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 3.2e-36 154.8 85 91.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 4.2e-36 154.5 95 85.3
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 5.5e-36 154.1 95 87.4
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.5e-36 154.1 95 81.1
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 9.4e-36 153.3 94 83.0
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.2e-35 152.9 92 83.7
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.2e-35 152.9 92 83.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.2e-35 152.9 97 84.5
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.6e-35 152.5 89 85.4
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.6e-35 152.5 93 82.8
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 2.1e-35 152.1 95 85.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 2.1e-35 152.1 95 83.2
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.7e-35 151.8 87 86.2
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.7e-35 151.8 87 86.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 2.7e-35 151.8 95 82.1
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.7e-35 151.8 94 83.0
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.7e-35 151.0 86 86.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 4.7e-35 151.0 95 81.1
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 6.1e-35 150.6 96 83.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 7.9e-35 150.2 89 85.4
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.0e-34 149.8 83 88.0
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.0e-34 149.8 94 84.0
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 1.8e-34 149.1 85 87.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.8e-34 149.1 90 86.7
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.8e-34 149.1 92 81.5
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.8e-34 149.1 89 82.0
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.8e-34 149.1 88 84.1
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.3e-34 148.7 89 82.0
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 3.0e-34 148.3 94 83.0
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 3.0e-34 148.3 94 81.9
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.9e-34 147.9 86 87.2
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 3.9e-34 147.9 88 84.1
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 5.2e-34 147.5 93 81.7
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.2e-34 147.5 92 81.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 6.7e-34 147.1 89 85.4
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.6e-33 145.2 110 73.6
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 4.4e-33 144.4 86 81.4
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 4.4e-33 144.4 119 68.9
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 7.4e-33 143.7 100 76.0
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.3e-32 142.9 86 82.6
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.3e-32 142.9 81 85.2
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.3e-32 142.9 81 84.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.3e-32 142.9 94 79.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.7e-32 142.5 94 78.7
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 4.8e-32 141.0 79 88.6
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.8e-32 141.0 113 69.0
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.3e-32 140.6 94 79.8
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 1.4e-31 139.4 78 92.3
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.4e-31 138.7 107 71.0
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 3.1e-31 138.3 87 79.3
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 7.0e-31 137.1 78 91.0
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 72.3
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 72.3
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.6e-30 136.0 94 72.3
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.0e-30 135.6 84 81.0
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 2.0e-30 135.6 74 87.8
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.0e-30 135.6 94 71.3
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 5.9e-30 134.0 75 88.0
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.2e-29 132.1 82 78.0
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 2.2e-29 132.1 93 72.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 3.8e-29 131.3 90 71.1
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 3.8e-29 131.3 90 71.1
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 3.8e-29 131.3 90 71.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.8e-29 131.3 79 86.1
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 8.5e-29 130.2 88 76.1
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.1e-28 129.8 84 85.7
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.5e-28 129.4 80 87.5
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 2.5e-28 128.6 89 69.7
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.2e-28 128.3 82 75.6
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 4.2e-28 127.9 96 69.8
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 4.2e-28 127.9 75 88.0
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 4.2e-28 127.9 84 75.0
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 5.5e-28 127.5 81 85.2
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 9.4e-28 126.7 82 78.0
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 9.4e-28 126.7 88 73.9
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.2e-27 126.3 79 82.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.1e-27 125.6 79 82.3
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 4.7e-27 124.4 95 67.4
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 6.1e-27 124.0 95 67.4
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 6.1e-27 124.0 95 67.4
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 6.1e-27 124.0 95 67.4
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 6.1e-27 124.0 95 67.4
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 8.0e-27 123.6 74 78.4
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 8.0e-27 123.6 88 72.7
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-26 122.9 88 71.6
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.8e-26 122.5 95 66.3
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 8.8e-26 120.2 86 68.6
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 7.5e-25 117.1 64 89.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.4e-23 112.8 77 74.0
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 7.7e-22 107.1 66 77.3
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.7e-21 105.9 76 75.0
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 8.5e-21 103.6 94 63.8
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 2.1e-19 99.0 80 67.5
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 5.2e-18 94.4 91 57.1
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 9.8e-17 90.1 67 76.1
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 1.4e-15 86.3 60 73.3
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 1.2e-14 83.2 47 85.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.7e-14 82.0 86 52.3
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 5.9e-14 80.9 62 59.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.4e-10 69.7 64 59.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 2.3e-10 68.9 61 59.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 60.4


User provided reference genes

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