Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 3.9e-46 188.0 108 100.0
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 2.5e-29 132.1 106 74.5
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 3.2e-24 115.2 109 65.1
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 2.7e-15 85.5 77 63.6
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 2.7e-15 85.5 90 58.9
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 3.6e-15 85.1 89 58.4
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 8.0e-15 84.0 95 58.9
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 1.4e-14 83.2 96 53.1
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 4.4e-13 78.2 93 58.1
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 5.7e-13 77.8 90 51.1
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 9.7e-13 77.0 102 52.9
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 1.7e-12 76.3 102 52.9
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.7e-12 76.3 102 52.9
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.7e-12 76.3 102 52.9
VMungo1383G1500 Vigna mungo HOM05D003683 ORTHO05D004143 1.7e-12 76.3 105 47.6
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 2.2e-12 75.9 96 54.2
Phvul.008G075300 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 2.2e-12 75.9 105 49.5
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 2.2e-12 75.9 90 56.7
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 2.8e-12 75.5 101 50.5
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 2.8e-12 75.5 93 55.9
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 3.7e-12 75.1 84 57.1
FAN01G1734 Fragaria x ananassa HOM05D003683 ORTHO05D004143 6.3e-12 74.3 102 52.9
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 8.2e-12 73.9 87 56.3
Glyma.09G268100 Glycine max HOM05D003683 ORTHO05D004143 1.8e-11 72.8 75 57.3
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.8e-11 72.8 82 57.3
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 3.1e-11 72.0 100 49.0
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 4.1e-11 71.6 94 55.3
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.6e-10 69.7 80 57.5
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 1.6e-10 69.7 101 51.5
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 3.5e-10 68.6 106 48.1
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 3.5e-10 68.6 95 52.6
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 5.9e-10 67.8 87 55.2
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.7e-09 66.2 92 54.3
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 2.9e-09 65.5 101 50.5
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 3.8e-09 65.1 84 50.0
Glyma.01G144700 Glycine max HOM05D003683 ORTHO05D004143 6.5e-09 64.3 96 46.9
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 6.5e-09 64.3 110 45.5
Sabra02G0118400 Salix brachista HOM05D003683 ORTHO05D004143 6.5e-09 64.3 90 48.9
CARHR171270 Cardamine hirsuta HOM05D003683 ORTHO05D004143 1.1e-08 63.5 79 53.2
MD07G1124000 Malus domestica HOM05D003683 ORTHO05D004143 1.1e-08 63.5 99 51.5
Atru.chr9.1472 Acer truncatum HOM05D003683 ORTHO05D004143 1.9e-08 62.8 94 50.0
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.9e-08 62.8 107 45.8
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.9e-08 62.8 76 53.9
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.9e-08 62.8 76 53.9
Medtr7g075120 Medicago truncatula HOM05D003683 ORTHO05D004143 2.5e-08 62.4 80 51.2
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 2.5e-08 62.4 70 57.1
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 3.2e-08 62.0 101 46.5
TAR375G1063 Trochodendron aralioides HOM05D003683 ORTHO05D004143 3.2e-08 62.0 99 47.5
Phvul.010G085600 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 7.2e-08 60.8 83 48.2
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 9.4e-08 60.5 97 44.3
Psat3g115360 Pisum sativum HOM05D003683 ORTHO05D004143 9.4e-08 60.5 89 48.3
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 2.1e-07 59.3 72 50.0
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 2.1e-07 59.3 78 53.8
arahy.Tifrunner.gnm1.ann1.1L371M Arachis hypogaea HOM05D003683 ORTHO05D004143 2.7e-07 58.9 102 39.2
COL.COLO4_23839 Corchorus olitorius HOM05D003683 ORTHO05D004143 2.7e-07 58.9 78 52.6
CsaV3_3G009560 Cucumis sativus L. HOM05D003683 ORTHO05D004143 2.7e-07 58.9 93 47.3
Gorai.003G167900 Gossypium raimondii HOM05D003683 ORTHO05D004143 2.7e-07 58.9 78 53.8
Gohir.D03G159600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 3.6e-07 58.5 78 53.8
ATR0820G297 Amborella trichopoda HOM05D003360 ORTHO05D003759 4.7e-07 58.2 44 72.7
PGSC0003DMG400012753 Solanum tuberosum HOM05D003683 ORTHO05D004143 6.1e-07 57.8 84 45.2
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 8.0e-07 57.4 81 50.6
Cc02_g36550 Coffea canephora HOM05D003683 ORTHO05D004143 8.0e-07 57.4 77 51.9
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 8.0e-07 57.4 101 43.6
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 8.0e-07 57.4 101 42.6
EL10Ac5g12652 Beta vulgaris HOM05D003683 ORTHO05D004143 1.0e-06 57.0 79 49.4
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 1.0e-06 57.0 105 38.1
Sabra03G0081600 Salix brachista HOM05D003683 ORTHO05D004143 1.0e-06 57.0 46 60.9
TWI23G1078 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 1.0e-06 57.0 98 48.0
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 1.4e-06 56.6 72 47.2
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 1.4e-06 56.6 72 47.2
QL12p015617 Quercus lobata HOM05D003683 ORTHO05D004143 1.4e-06 56.6 90 45.6
BcaB02g07396 Brassica carinata HOM05D003683 ORTHO05D004143 1.8e-06 56.2 87 48.3
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 1.8e-06 56.2 78 47.4
CARHR140640 Cardamine hirsuta HOM05D003683 ORTHO05D004143 1.8e-06 56.2 73 50.7
Sabra01G0087900 Salix brachista HOM05D003683 ORTHO05D004143 1.8e-06 56.2 79 48.1
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 2.3e-06 55.8 96 42.7
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 2.3e-06 55.8 96 42.7
Solyc01g091490.3 Solanum lycopersicum HOM05D003683 ORTHO05D004143 2.3e-06 55.8 83 45.8
AT2G45450 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 3.0e-06 55.5 73 50.7
CiPaw.11G145300 Carya illinoinensis HOM05D003683 ORTHO05D004143 3.0e-06 55.5 78 47.4
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 3.0e-06 55.5 96 51.0
Thecc.03G264300 Theobroma cacao HOM05D003683 ORTHO05D004143 3.0e-06 55.5 78 52.6
GSVIVG01019925001 Vitis vinifera HOM05D003683 ORTHO05D004143 3.0e-06 55.5 78 47.4
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 4.0e-06 55.1 106 42.5
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 4.0e-06 55.1 96 50.0
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 4.0e-06 55.1 72 47.2
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 4.0e-06 55.1 82 48.8
AL4G44620 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 5.2e-06 54.7 73 50.7
CsaV3_5G003580 Cucumis sativus L. HOM05D003683 ORTHO05D004143 5.2e-06 54.7 106 43.4
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 5.2e-06 54.7 76 46.1
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 5.2e-06 54.7 78 48.7
AT3G60890 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 6.7e-06 54.3 78 46.2
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 6.7e-06 54.3 72 50.0
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 6.7e-06 54.3 77 44.2
DCAR_008443 Daucus carota HOM05D003683 ORTHO05D004143 6.7e-06 54.3 96 38.5
Manes.01G071300 Manihot esculenta HOM05D003683 ORTHO05D004143 6.7e-06 54.3 78 47.4
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 6.7e-06 54.3 80 51.2
A04p33850 Brassica napus HOM05D003683 ORTHO05D004143 8.8e-06 53.9 72 44.4
BraA04t18845Z Brassica rapa HOM05D003683 ORTHO05D004143 8.8e-06 53.9 72 44.4
PGR042G1830 Punica granatum HOM05D003683 ORTHO05D004143 8.8e-06 53.9 51 56.9


User provided reference genes

Program Settings