Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 2.4e-270 934.9 464 100.0
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 3.1e-233 811.6 476 85.7
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 1.5e-232 809.3 467 85.4
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 1.2e-221 773.1 465 82.4
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 6.7e-220 767.3 464 81.2
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 5.7e-219 764.2 465 81.7
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 5.7e-219 764.2 465 81.1
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 6.9e-217 757.3 463 80.8
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 2.6e-216 755.4 466 80.5
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 7.7e-216 753.8 463 80.1
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.0e-215 753.4 466 80.5
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 2.2e-215 752.3 470 79.4
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 4.2e-214 748.0 464 79.5
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 6.1e-213 744.2 465 77.4
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 1.0e-212 743.4 462 77.9
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.4e-212 743.0 465 77.0
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 2.3e-212 742.3 465 77.0
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 2.6e-211 738.8 466 77.9
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.6e-211 738.8 464 76.7
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 9.7e-211 736.9 466 77.9
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.2e-210 735.7 465 76.3
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.8e-210 734.6 465 76.1
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.1e-209 733.4 468 77.8
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 1.8e-209 732.6 470 75.7
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 9.1e-209 730.3 468 76.7
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 1.2e-208 729.9 452 79.4
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.6e-208 728.8 464 75.2
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 3.5e-208 728.4 462 76.6
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.0e-207 726.9 468 77.6
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.7e-207 726.1 464 77.2
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 2.2e-207 725.7 471 76.4
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 2.9e-207 725.3 464 76.9
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 8.5e-207 723.8 468 76.5
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 3.2e-206 721.8 465 76.8
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 7.2e-206 720.7 464 75.9
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 7.2e-206 720.7 465 74.2
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 3.6e-205 718.4 487 72.9
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.0e-204 716.8 467 75.8
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 1.0e-204 716.8 460 76.7
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 4.0e-204 714.9 465 74.0
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 8.8e-204 713.8 460 76.5
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 5.7e-203 711.1 461 73.8
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 5.7e-203 711.1 472 75.0
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.3e-202 709.9 467 74.1
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 3.7e-202 708.4 462 73.8
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 6.3e-202 707.6 461 73.8
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 8.2e-202 707.2 465 74.2
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 8.2e-202 707.2 461 76.4
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 8.2e-202 707.2 467 76.0
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 8.2e-202 707.2 461 73.5
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 2.4e-201 705.7 464 75.4
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 3.1e-201 705.3 464 75.4
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 3.1e-201 705.3 464 74.4
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.2e-200 703.4 510 69.4
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 2.6e-200 702.2 456 73.5
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 5.9e-200 701.0 466 75.8
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 2.9e-199 698.7 487 73.1
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 8.5e-199 697.2 457 77.0
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 2.5e-198 695.7 459 75.2
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 2.5e-198 695.7 469 73.8
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 4.2e-198 694.9 464 73.1
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 6.1e-197 691.0 471 72.6
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 3.0e-196 688.7 466 71.5
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 4.0e-196 688.3 466 72.7
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 5.2e-196 688.0 471 72.4
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 4.4e-195 684.9 460 74.1
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 7.5e-195 684.1 465 73.5
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 7.5e-195 684.1 465 73.5
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 3.7e-194 681.8 460 73.7
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 8.3e-194 680.6 465 72.9
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.1e-193 680.2 463 73.7
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 1.8e-193 679.5 466 69.5
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 3.1e-193 678.7 465 73.3
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 3.1e-193 678.7 465 73.3
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 2.0e-192 676.0 465 73.1
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.7e-191 672.9 465 72.9
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 8.5e-191 670.6 439 74.7
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.5e-190 669.8 484 69.8
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.2e-189 666.8 471 68.8
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.6e-189 666.4 396 81.3
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 8.0e-189 664.1 463 70.6
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 9.8e-187 657.1 464 70.0
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.3e-183 646.7 382 80.1
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.8e-183 645.2 468 69.0
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.1e-181 639.4 407 75.9
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.4e-172 610.1 387 77.0
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 3.1e-172 609.0 411 72.0
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.3e-162 577.0 414 66.4
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 6.4e-162 574.7 409 66.5
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.3e-159 566.2 409 66.0
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 5.8e-155 551.6 324 84.6
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.3e-151 540.4 468 62.2
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 2.4e-140 503.1 459 59.7
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 5.3e-140 501.9 345 71.6
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 1.7e-122 443.7 400 55.0
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 5.5e-121 438.7 407 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 2.8e-117 426.4 398 54.5
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.4e-116 423.3 403 53.1
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 7.4e-110 401.7 395 52.2
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 1.0e-98 364.8 416 45.9
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.6e-78 297.0 199 72.9
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 1.0e-71 275.0 187 72.2
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 9.5e-65 251.9 204 60.3
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 9.5e-65 251.9 204 60.3
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 3.4e-54 216.9 193 57.0
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.2e-27 128.6 88 73.9
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 3.4e-22 110.5 61 83.6


User provided reference genes

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