Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G160700 Carya illinoinensis HOM05D010060 ORTHO05D010672 4.8e-69 265.8 349 100.0
COL.COLO4_26651 Corchorus olitorius HOM05D010060 ORTHO05D010672 3.0e-15 87.0 117 65.0
Thecc.06G037600 Theobroma cacao HOM05D010060 ORTHO05D010672 5.2e-15 86.3 104 45.2
Prupe.3G095500 Prunus persica HOM05D010060 ORTHO05D010672 9.8e-14 82.0 114 61.4
Sabra03G0131400 Salix brachista HOM05D010060 ORTHO05D010672 4.8e-13 79.7 98 53.1
Potri.003G179301 Populus trichocarpa HOM05D010060 ORTHO05D010672 2.4e-12 77.4 107 49.5
Nn8g39734 Nelumbo nucifera HOM05D010060 ORTHO05D010672 7.0e-12 75.9 116 55.2
Manes.04G105502 Manihot esculenta HOM05D010060 ORTHO05D010672 9.1e-12 75.5 115 52.2
Glyma.07G026000 Glycine max HOM05D012449 ORTHO05D010672 3.5e-11 73.6 101 45.5
Carub.0001s1564 Capsella rubella HOM05D012449 ORTHO05D010672 5.9e-11 72.8 71 54.9
ClCG07G012370 Citrullus lanatus HOM05D010060 ORTHO05D010672 5.9e-11 72.8 115 42.6
BcaB03g14516 Brassica carinata HOM05D012449 ORTHO05D010672 2.3e-10 70.9 51 66.7
MELO3C017856.2 Cucumis melo HOM05D010060 ORTHO05D010672 2.3e-10 70.9 113 42.5
FvH4_1g03660 Fragaria vesca HOM05D036469 ORTHO05D010672 2.3e-10 70.9 38 73.7
FAN05G1812 Fragaria x ananassa HOM05D036469 ORTHO05D010672 2.3e-10 70.9 38 73.7
FAN19G1720 Fragaria x ananassa HOM05D036469 ORTHO05D010672 2.9e-10 70.5 43 72.1
Gohir.D05G122000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 6.5e-10 69.3 45 73.3
Gorai.009G125500 Gossypium raimondii HOM05D010060 ORTHO05D010672 6.5e-10 69.3 45 73.3
PSO832G3355 Papaver somniferum HOM05D010060 ORTHO05D010672 1.1e-09 68.6 49 63.3
BcaC07g41475 Brassica carinata HOM05D012449 ORTHO05D010672 3.3e-09 67.0 43 67.4
A09p61130 Brassica napus HOM05D012449 ORTHO05D010672 3.3e-09 67.0 43 67.4
BraA09t41487Z Brassica rapa HOM05D012449 ORTHO05D010672 3.3e-09 67.0 43 67.4
CANSAT56G0640 Cannabis sativa HOM05D010060 ORTHO05D010672 3.3e-09 67.0 106 56.6
Cc04_g04840 Coffea canephora HOM05D013655 ORTHO05D010672 3.3e-09 67.0 118 49.2
Oeu010090.1 Olea europaea HOM05D013655 ORTHO05D010672 4.2e-09 66.6 104 44.2
Gohir.A05G121000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 5.5e-09 66.2 45 71.1
EL10Ac8g19448 Beta vulgaris HOM05D010060 ORTHO05D010672 7.2e-09 65.9 106 54.7
DCAR_025534 Daucus carota HOM05D010060 ORTHO05D010672 7.2e-09 65.9 43 67.4
THA.LOC104813310 Tarenaya hassleriana HOM05D010060 ORTHO05D010672 1.2e-08 65.1 43 69.8
Aa31LG7G430 Aethionema arabicum HOM05D012449 ORTHO05D010672 2.1e-08 64.3 44 61.4
BolC8t52019H Brassica oleracea HOM05D012449 ORTHO05D010672 2.8e-08 63.9 53 60.4
PGR031G0538 Punica granatum HOM05D010060 ORTHO05D010672 2.8e-08 63.9 48 64.6
C08p44730 Brassica napus HOM05D012449 ORTHO05D010672 1.0e-07 62.0 48 58.3
AL1G27990 Arabidopsis lyrata HOM05D012449 ORTHO05D010672 2.3e-07 60.8 48 58.3
ECA232G3742 Erigeron canadensis HOM05D013655 ORTHO05D010672 2.3e-07 60.8 102 42.2
VMungo0331G1910 Vigna mungo HOM05D012449 ORTHO05D010672 8.9e-07 58.9 50 54.0
Phvul.010G159300 Phaseolus vulgaris HOM05D012449 ORTHO05D010672 2.6e-06 57.4 51 52.9
arahy.Tifrunner.gnm1.ann1.14Y83U Arachis hypogaea HOM05D010060 ORTHO05D010672 4.4e-06 56.6 38 63.2
Psat7g258600 Pisum sativum HOM05D010060 ORTHO05D010672 5.7e-06 56.2 45 62.2


User provided reference genes

Program Settings