Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G155600 Carya illinoinensis HOM05D005165 ORTHO05D006361 5.4e-62 240.7 115 100.0
CiPaw.09G089900 Carya illinoinensis HOM05D005165 ORTHO05D006361 8.1e-34 147.1 97 76.3
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 2.1e-26 122.5 99 62.6
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 6.3e-26 120.9 80 75.0
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 8.2e-18 94.0 70 65.7
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 2.4e-17 92.4 100 51.0
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 3.1e-17 92.0 76 64.5
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 4.1e-17 91.7 74 63.5
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 6.9e-17 90.9 74 63.5
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 9.0e-17 90.5 69 63.8
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 1.5e-16 89.7 74 62.2
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 2.6e-16 89.0 86 58.1
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 2.6e-16 89.0 86 58.1
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 5.9e-16 87.8 76 64.5
GSVIVG01002377001 Vitis vinifera HOM05D005165 ORTHO05D006361 7.7e-16 87.4 103 47.6
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 2.2e-15 85.9 86 54.7
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 6.5e-15 84.3 78 56.4
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 8.5e-15 84.0 103 45.6
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 1.1e-14 83.6 86 54.7
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 1.9e-14 82.8 79 57.0
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 1.9e-14 82.8 87 51.7
MSTRG.15978 Avicennia marina HOM05D005165 ORTHO05D006361 2.5e-14 82.4 83 56.6
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.5e-14 82.4 79 58.2
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.5e-14 82.4 79 58.2
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 3.2e-14 82.0 84 53.6
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 3.2e-14 82.0 76 57.9
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 5.5e-14 81.3 73 60.3
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 5.5e-14 81.3 70 62.9
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 7.2e-14 80.9 73 58.9
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 7.2e-14 80.9 67 62.7
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 9.4e-14 80.5 78 56.4
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 3.6e-13 78.6 67 61.2
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 3.6e-13 78.6 79 53.2
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 7.9e-13 77.4 69 58.0
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 1.4e-12 76.6 81 55.6
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 1.8e-12 76.3 80 56.2
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 1.8e-12 76.3 73 56.2
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 2.3e-12 75.9 79 53.2
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 6.7e-12 74.3 108 43.5
Cpa.g.sc198.36 Carica papaya HOM05D005165 ORTHO05D006361 8.8e-12 73.9 87 50.6
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 1.1e-11 73.6 81 51.9
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 1.1e-11 73.6 69 59.4
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 1.5e-11 73.2 76 52.6
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 2.0e-11 72.8 65 55.4
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 2.5e-11 72.4 90 47.8
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 2.5e-11 72.4 74 55.4
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 2.5e-11 72.4 69 58.0
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 3.3e-11 72.0 72 54.2
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 3.3e-11 72.0 87 47.1
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 4.3e-11 71.6 77 53.2
Gohir.A06G147800 Gossypium hirsutum HOM05D005165 ORTHO05D006361 7.4e-11 70.9 72 52.8
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 7.4e-11 70.9 64 54.7
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 7.4e-11 70.9 67 58.2
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 9.7e-11 70.5 77 54.5
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 9.7e-11 70.5 65 56.9
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.3e-10 70.1 72 52.8
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 1.3e-10 70.1 72 52.8
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 1.7e-10 69.7 82 56.1
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 2.8e-10 68.9 79 53.2
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 3.7e-10 68.6 87 48.3
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 3.7e-10 68.6 87 48.3
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 3.7e-10 68.6 83 51.8
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 4.8e-10 68.2 77 54.5
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 4.8e-10 68.2 82 53.7
Lsat_1_v5_gn_7_17620 Lactuca sativa HOM05D005165 ORTHO05D006361 6.3e-10 67.8 75 53.3
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 8.2e-10 67.4 81 51.9
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 8.2e-10 67.4 75 50.7
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 8.2e-10 67.4 86 46.5
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 1.1e-09 67.0 65 53.8
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 1.4e-09 66.6 81 54.3
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.8e-09 66.2 75 56.0
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 3.1e-09 65.5 79 49.4
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 3.1e-09 65.5 62 56.5
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 4.1e-09 65.1 83 47.0
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 4.1e-09 65.1 77 51.9
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 4.1e-09 65.1 77 51.9
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 5.3e-09 64.7 106 41.5
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 5.3e-09 64.7 81 51.9
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 9.1e-09 63.9 80 52.5
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 1.2e-08 63.5 92 47.8
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 1.2e-08 63.5 78 52.6
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 2.0e-08 62.8 77 50.6
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 4.5e-08 61.6 79 49.4
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 4.5e-08 61.6 75 44.0
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 5.9e-08 61.2 77 48.1
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 1.0e-07 60.5 65 50.8
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 1.0e-07 60.5 75 42.7
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 1.3e-07 60.1 77 49.4
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 3.8e-07 58.5 97 35.1
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 5.0e-07 58.2 70 50.0
FAN25G2437 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.1e-06 57.0 50 58.0
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 1.1e-06 57.0 97 34.0
ATR0752G018 Amborella trichopoda HOM05D005165 ORTHO05D006361 4.2e-06 55.1 108 33.3


User provided reference genes

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