Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 5.7e-98 360.9 184 100.0
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 3.2e-56 222.2 182 67.6
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.3e-54 216.9 182 65.4
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 1.6e-47 193.4 185 62.2
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 1.1e-35 154.1 170 55.9
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 4.1e-35 152.1 167 59.9
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 6.9e-35 151.4 168 56.0
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.3e-33 147.1 203 47.8
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 2.9e-33 146.0 193 49.7
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 8.4e-33 144.4 171 58.5
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.1e-32 144.1 165 57.0
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 5.5e-32 141.7 195 49.7
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.1e-31 139.8 169 55.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 3.5e-31 139.0 184 50.5
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.1e-31 138.3 137 59.1
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 6.1e-31 138.3 184 47.8
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.0e-30 137.5 171 56.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 2.3e-30 136.3 188 49.5
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 5.1e-30 135.2 176 48.3
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 5.1e-30 135.2 187 45.5
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.1e-29 134.0 158 55.1
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 1.5e-29 133.7 160 52.5
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 3.3e-29 132.5 179 50.8
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 9.7e-29 131.0 192 47.4
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.8e-28 129.4 188 48.4
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.4e-27 126.3 182 48.4
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 4.1e-27 125.6 187 44.9
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 5.3e-27 125.2 197 46.7
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 6.9e-27 124.8 199 46.2
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.2e-26 124.0 135 54.1
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 1.2e-26 124.0 181 47.5
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.5e-26 123.6 158 53.2
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 2.6e-26 122.9 200 46.5
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 3.4e-26 122.5 177 47.5
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 4.5e-26 122.1 176 46.6
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 7.7e-26 121.3 178 45.5
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.0e-25 120.9 186 45.2
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-25 119.8 135 54.1
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 2.9e-25 119.4 137 54.0
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 2.9e-25 119.4 158 51.3
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.8e-25 119.0 124 58.1
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 5.0e-25 118.6 184 45.1
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 8.5e-25 117.9 187 46.5
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.4e-24 117.1 187 49.2
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.4e-24 117.1 175 49.1
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.5e-24 116.3 159 51.6
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 4.2e-24 115.5 184 45.1
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.5e-24 115.2 137 54.7
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 5.5e-24 115.2 193 44.6
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 7.2e-24 114.8 184 44.6
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 1.2e-23 114.0 177 44.6
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 2.1e-23 113.2 195 43.1
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.6e-23 112.5 102 57.8
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 4.6e-23 112.1 175 44.0
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 4.6e-23 112.1 167 46.7
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 4.6e-23 112.1 167 46.7
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 6.1e-23 111.7 185 44.9
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 6.1e-23 111.7 195 43.6
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.4e-22 110.5 197 42.6
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.4e-22 110.5 191 47.1
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.4e-22 110.5 192 44.8
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 1.8e-22 110.2 195 45.6
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.8e-22 110.2 131 53.4
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 3.9e-22 109.0 139 53.2
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 5.1e-22 108.6 142 51.4
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 6.7e-22 108.2 184 45.1
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.5e-21 107.1 189 43.9
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.5e-21 106.3 186 44.1
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 3.3e-21 105.9 179 43.6
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.3e-21 105.9 163 47.9
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.3e-21 105.9 173 42.8
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 5.7e-21 105.1 185 42.2
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 9.7e-21 104.4 186 41.9
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-20 104.0 104 56.7
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 1.3e-20 104.0 187 46.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.2e-20 103.2 166 45.2
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 2.8e-20 102.8 190 43.2
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 2.8e-20 102.8 185 43.2
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.8e-20 102.8 186 43.0
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 3.7e-20 102.4 187 46.0
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 8.2e-20 101.3 123 52.8
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 8.2e-20 101.3 192 43.8
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.1e-19 100.9 190 43.2
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 4.1e-19 99.0 160 39.4
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 5.3e-19 98.6 184 43.5
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 5.3e-19 98.6 184 43.5
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 6.9e-19 98.2 98 56.1
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-18 97.1 137 48.2
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.5e-18 97.1 175 40.0
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 2.0e-18 96.7 95 58.9
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.7e-17 93.6 187 43.3
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 2.9e-17 92.8 191 36.6
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 3.8e-17 92.4 157 36.3
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 6.5e-17 91.7 185 39.5
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 6.5e-17 91.7 111 51.4
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 8.5e-17 91.3 187 40.6
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.9e-16 90.1 174 42.5
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 3.6e-15 85.9 131 48.1
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 4.7e-15 85.5 189 40.7
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 1.0e-14 84.3 97 51.5
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 8.8e-14 81.3 184 37.0
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 2.0e-13 80.1 95 50.5
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 1.3e-12 77.4 148 40.5
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.8e-12 76.3 95 48.4
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 3.7e-12 75.9 106 49.1
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.6e-10 70.5 173 41.6
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 5.9e-10 68.6 59 62.7
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 7.7e-10 68.2 124 46.0
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 7.7e-10 68.2 120 43.3
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 6.5e-09 65.1 110 46.4
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 6.5e-09 65.1 43 76.7
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 5.5e-08 62.0 157 34.4
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 2.1e-07 60.1 133 36.1
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 4.7e-07 58.9 83 48.2
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.7e-07 58.9 70 50.0
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 6.1e-07 58.5 153 37.9
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.8e-06 57.0 159 34.6
FvH4_5g24053 Fragaria vesca HOM05D031413 ORTHO05D029585 3.0e-06 56.2 99 47.5
FvH4_6g22601 Fragaria vesca HOM05D017723 ORTHO05D035582 3.0e-06 56.2 93 46.2
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 6.7e-06 55.1 140 36.4
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 8.8e-06 54.7 170 32.9


User provided reference genes

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