Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 2.8e-202 708.4 355 100.0
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 4.3e-166 588.2 356 82.6
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 7.5e-163 577.4 373 78.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 8.6e-159 563.9 333 82.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.5e-158 563.1 323 85.8
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 6.2e-157 557.8 342 81.6
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.4e-156 556.6 331 83.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.5e-155 553.1 331 81.9
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.6e-155 552.4 353 77.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 3.4e-155 552.0 327 82.3
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 8.3e-154 547.4 331 81.0
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 5.4e-153 544.7 325 82.2
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 7.1e-153 544.3 329 81.8
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.6e-152 543.1 332 79.8
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.6e-152 543.1 332 79.8
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.7e-149 531.6 332 78.3
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 6.2e-149 531.2 336 79.2
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 5.2e-148 528.1 328 79.9
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.4e-147 525.0 328 79.3
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 5.8e-147 524.6 333 78.4
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 1.3e-146 523.5 325 78.5
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.2e-146 522.7 320 80.0
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.2e-146 522.7 328 79.3
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 8.4e-146 520.8 349 74.8
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 7.1e-145 517.7 349 74.2
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 2.7e-144 515.8 350 72.9
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.0e-143 512.3 311 81.0
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.5e-142 509.2 342 75.1
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.8e-141 505.8 337 73.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.8e-141 505.8 310 79.0
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.8e-141 505.8 310 79.0
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 4.7e-141 505.0 313 79.2
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.1e-140 503.8 337 75.1
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.1e-140 503.8 310 78.4
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.1e-140 503.8 339 74.6
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.4e-140 503.4 328 75.6
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.8e-140 503.1 313 76.7
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.8e-140 503.1 311 79.1
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.8e-140 503.1 311 79.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 2.4e-140 502.7 311 78.8
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 5.3e-140 501.5 342 74.6
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 5.3e-140 501.5 312 77.9
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 9.0e-140 500.7 310 78.4
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 9.0e-140 500.7 338 73.1
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.2e-139 500.4 328 74.7
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.5e-139 500.0 310 78.1
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.0e-139 499.6 331 73.7
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.6e-139 499.2 310 78.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 5.8e-139 498.0 325 76.6
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 5.8e-139 498.0 335 72.2
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.4e-137 493.4 319 77.1
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 3.2e-137 492.3 337 72.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.2e-137 491.9 348 72.1
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.2e-137 491.9 322 72.4
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 9.3e-137 490.7 350 71.1
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.1e-136 489.6 313 73.8
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.7e-135 486.5 313 75.4
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 5.6e-134 481.5 323 72.8
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 9.6e-134 480.7 290 80.0
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 2.8e-133 479.2 361 67.9
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 4.8e-133 478.4 338 72.2
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 8.1e-133 477.6 329 72.0
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 3.4e-131 472.2 272 85.3
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 1.7e-130 469.9 320 70.9
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.9e-130 469.2 320 71.2
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 8.4e-130 467.6 342 68.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 5.4e-129 464.9 320 70.0
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 7.1e-129 464.5 316 72.8
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.3e-127 460.3 320 71.2
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.9e-127 458.8 320 70.6
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 7.4e-126 454.5 273 81.0
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.3e-125 453.8 310 71.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 6.2e-125 451.4 317 69.4
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.8e-124 449.9 314 68.8
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 1.2e-123 447.2 320 68.8
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.5e-123 446.8 293 73.4
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 3.4e-123 445.7 310 71.3
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.9e-121 439.9 338 65.4
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.9e-121 439.9 339 64.6
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 7.1e-121 438.0 312 67.9
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.2e-120 437.2 301 75.4
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.2e-120 437.2 334 65.6
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.2e-120 437.2 314 65.0
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.6e-112 410.2 331 63.1
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.1e-108 397.5 265 75.5
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.8e-108 396.7 250 78.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.4e-107 392.5 254 76.0
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.9e-107 391.7 341 61.9
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 5.5e-105 385.2 320 61.6
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 9.4e-105 384.4 326 57.1
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 4.3e-102 375.6 290 61.7
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.3e-98 364.0 340 52.6
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.3e-95 353.2 331 52.6
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.3e-93 345.1 333 50.5
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.1e-92 342.4 312 52.2
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.1e-92 342.4 312 52.2
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.5e-90 335.1 308 51.9
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 3.3e-86 322.8 245 66.1
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.8e-85 319.7 353 46.2
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.8e-85 318.9 319 49.5
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.1e-84 317.8 259 58.3
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-84 317.8 307 50.5
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 4.1e-84 315.8 315 52.7
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.3e-84 315.5 326 47.5
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 6.5e-82 308.5 350 49.1
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.7e-72 276.6 323 49.5
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.3e-71 273.5 316 43.7
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 3.3e-65 253.1 213 56.8
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.1e-47 194.9 276 40.9
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-31 141.7 129 58.1
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 8.9e-31 138.7 139 52.5
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 5.6e-09 66.2 40 72.5


User provided reference genes

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