Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 2.7e-58 228.4 112 100.0
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 3.5e-13 78.6 111 50.5
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 8.5e-12 73.9 108 43.5
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 8.5e-12 73.9 107 42.1
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.9e-11 72.8 107 44.9
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 9.4e-11 70.5 107 42.1
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.1e-10 69.3 105 39.0
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 2.1e-10 69.3 109 39.4
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 4.7e-10 68.2 111 38.7
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 6.1e-10 67.8 105 39.0
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 8.0e-10 67.4 111 38.7
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 8.0e-10 67.4 109 43.1
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 1.0e-09 67.0 105 41.0
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 1.4e-09 66.6 46 69.6
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 1.8e-09 66.2 113 39.8
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 2.3e-09 65.9 105 38.1
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 3.0e-09 65.5 105 40.0
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 3.0e-09 65.5 111 37.8
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 3.0e-09 65.5 72 45.8
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 4.0e-09 65.1 105 37.1
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 4.0e-09 65.1 112 36.6
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 5.2e-09 64.7 108 38.0
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 6.8e-09 64.3 114 38.6
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 1.2e-08 63.5 105 42.9
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 1.2e-08 63.5 110 38.2
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 1.5e-08 63.2 104 41.3
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 1.5e-08 63.2 114 36.0
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 2.6e-08 62.4 49 61.2
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 7.5e-08 60.8 43 65.1
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 9.8e-08 60.5 45 62.2
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 1.3e-07 60.1 106 40.6
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 1.7e-07 59.7 51 52.9
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.7e-07 59.7 106 35.8
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 2.8e-07 58.9 46 58.7
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 3.7e-07 58.5 42 64.3
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 3.7e-07 58.5 42 64.3
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 3.7e-07 58.5 52 59.6
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 3.7e-07 58.5 43 62.8
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 4.8e-07 58.2 107 36.4
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 6.3e-07 57.8 43 62.8
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 6.3e-07 57.8 105 36.2
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 6.3e-07 57.8 63 42.9
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 8.3e-07 57.4 111 36.0
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 8.3e-07 57.4 108 31.5
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.4e-06 56.6 115 40.9
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 1.8e-06 56.2 54 53.7
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.8e-06 56.2 108 38.9
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 1.8e-06 56.2 54 51.9
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 4.1e-06 55.1 105 31.4
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 4.1e-06 55.1 64 42.2
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 5.4e-06 54.7 43 65.1
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 7.0e-06 54.3 45 53.3
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 7.0e-06 54.3 43 65.1
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 9.1e-06 53.9 38 63.2


User provided reference genes

Program Settings