Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 6.8e-34 146.7 73 100.0
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.4e-23 110.5 73 78.1
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 1.6e-19 99.0 73 68.5
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 2.1e-19 98.6 72 69.4
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 2.8e-19 98.2 73 68.5
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 5.2e-18 94.0 73 63.0
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.5e-17 92.4 58 75.9
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 1.5e-17 92.4 73 61.6
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 7.5e-17 90.1 74 66.2
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 9.8e-17 89.7 76 60.5
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 3.7e-16 87.8 78 55.1
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 6.3e-16 87.0 72 62.5
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 6.3e-16 87.0 72 62.5
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 2.4e-15 85.1 77 58.4
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 5.4e-15 84.0 73 54.8
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 9.2e-15 83.2 69 60.9
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.6e-14 82.4 76 51.3
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 2.0e-14 82.0 76 57.9
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 1.0e-13 79.7 74 51.4
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 1.7e-13 79.0 72 56.9
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 1.7e-13 79.0 76 52.6
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.5e-12 75.9 73 54.8
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 2.5e-12 75.1 73 53.4
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 3.3e-12 74.7 73 53.4
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 7.3e-12 73.6 69 53.6
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 9.5e-12 73.2 66 50.0
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 2.1e-11 72.0 75 57.3
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 2.1e-11 72.0 69 56.5
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 4.7e-11 70.9 71 52.1
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 1.0e-10 69.7 57 59.6
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 4.0e-10 67.8 73 46.6
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 5.2e-10 67.4 78 50.0
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 1.2e-09 66.2 70 48.6
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 1.5e-09 65.9 78 44.9
Sabra01G0138800 Salix brachista HOM05D008383 ORTHO05D010186 1.5e-09 65.9 77 46.8
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 2.0e-09 65.5 77 50.6
Oeu026725.1 Olea europaea HOM05D008383 ORTHO05D010186 2.0e-09 65.5 80 51.2
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 2.6e-09 65.1 74 47.3
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.6e-09 65.1 78 46.2
GSVIVG01016930001 Vitis vinifera HOM05D008383 ORTHO05D010186 2.6e-09 65.1 55 54.5
Atru.chr1.3568 Acer truncatum HOM05D030296 ORTHO05D026273 3.4e-09 64.7 68 48.5
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 3.4e-09 64.7 72 50.0
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 3.4e-09 64.7 78 46.2
GSVIVG01016932001 Vitis vinifera HOM05D008383 ORTHO05D010186 1.3e-08 62.8 51 54.9
Nn8g38999 Nelumbo nucifera HOM05D008383 ORTHO05D010186 1.7e-08 62.4 75 44.0
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 2.2e-08 62.0 71 46.5
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 8.3e-08 60.1 65 47.7
Sabra03G0035500 Salix brachista HOM05D008383 ORTHO05D010186 1.1e-07 59.7 76 44.7
Rhsim12G0204100 Rhododendron simsii HOM05D008383 ORTHO05D010186 1.9e-07 58.9 78 39.7
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 5.4e-07 57.4 69 44.9
Manes.11G030700 Manihot esculenta HOM05D008383 ORTHO05D010186 5.4e-07 57.4 77 44.2
Hma1.2p1_0764F.1_g214990 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 7.0e-07 57.0 77 49.4
CSS0040561 Camellia sinensis var. sinensis HOM05D008383 ORTHO05D010186 2.0e-06 55.5 75 48.0
TAR626G1700 Trochodendron aralioides HOM05D001398 ORTHO05D001467 3.5e-06 54.7 62 45.2
Dinv37958 Davidia involucrata HOM05D027392 ORTHO05D016433 6.0e-06 53.9 76 46.1
Sabra02G0114800 Salix brachista HOM05D008383 ORTHO05D010186 7.8e-06 53.5 76 42.1


User provided reference genes

Program Settings