Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.5e-77 292.7 147 100.0
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 9.4e-59 230.3 147 79.6
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.1e-56 223.4 147 78.2
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 3.7e-55 218.4 169 69.2
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 6.3e-55 217.6 147 76.2
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 1.4e-54 216.5 147 76.2
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 1.5e-53 213.0 149 73.2
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.5e-53 213.0 149 73.2
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.3e-52 209.9 149 71.8
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 6.5e-52 207.6 149 71.8
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 6.5e-52 207.6 147 72.8
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 7.2e-51 204.1 148 72.3
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 1.2e-50 203.4 149 71.8
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 2.3e-49 199.1 148 70.9
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.4e-46 189.9 146 71.2
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.8e-46 189.5 149 69.1
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 4.1e-46 188.3 149 65.8
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.7e-44 183.0 148 66.9
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.7e-44 183.0 147 65.3
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 2.9e-44 182.2 147 64.6
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 1.1e-43 180.3 146 69.2
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.4e-43 179.9 151 64.9
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 3.2e-43 178.7 147 63.9
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 4.2e-43 178.3 160 61.9
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 9.4e-43 177.2 147 66.0
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 9.4e-43 177.2 147 64.6
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 2.1e-42 176.0 149 68.5
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 2.7e-42 175.6 149 65.1
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 2.7e-42 175.6 149 64.4
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 3.6e-42 175.3 145 63.4
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 3.6e-42 175.3 145 64.8
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 4.7e-42 174.9 147 67.3
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 4.7e-42 174.9 148 67.6
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 2.3e-41 172.6 147 60.5
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 3.0e-41 172.2 147 65.3
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.2e-41 171.4 147 61.9
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 8.8e-41 170.6 150 64.7
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.5e-40 169.9 157 61.8
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 2.6e-40 169.1 141 64.5
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 2.6e-40 169.1 151 63.6
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 9.7e-40 167.2 146 63.7
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 3.7e-39 165.2 150 60.7
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 4.8e-39 164.9 148 64.2
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 4.8e-39 164.9 147 62.6
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 6.3e-39 164.5 151 62.9
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 6.3e-39 164.5 151 60.9
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 8.2e-39 164.1 150 60.0
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 1.8e-38 162.9 151 62.3
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 4.1e-38 161.8 148 63.5
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 7.0e-38 161.0 127 64.6
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.2e-37 160.2 151 62.9
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 1.2e-37 160.2 150 56.0
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 1.6e-37 159.8 150 60.7
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 1.6e-37 159.8 150 60.0
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 2.0e-37 159.5 151 61.6
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 2.6e-37 159.1 150 61.3
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 2.6e-37 159.1 150 61.3
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 4.5e-37 158.3 151 60.3
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 5.9e-37 157.9 151 60.9
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 5.9e-37 157.9 151 60.9
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 7.7e-37 157.5 150 59.3
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 7.7e-37 157.5 151 60.9
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 1.0e-36 157.1 152 60.5
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 1.7e-36 156.4 148 60.8
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 2.2e-36 156.0 147 61.2
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 2.9e-36 155.6 141 63.1
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 5.0e-36 154.8 151 61.6
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 6.5e-36 154.5 147 60.5
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 1.9e-35 152.9 149 59.1
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 2.5e-35 152.5 155 60.0
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 2.5e-35 152.5 151 59.6
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 4.2e-35 151.8 142 62.7
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 4.2e-35 151.8 147 60.5
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 5.5e-35 151.4 149 61.1
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 9.4e-35 150.6 152 59.9
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 9.4e-35 150.6 148 59.5
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 9.4e-35 150.6 140 62.1
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 1.2e-34 150.2 151 58.3
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 3.6e-34 148.7 149 61.1
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 8.0e-34 147.5 123 61.0
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 8.0e-34 147.5 98 75.5
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.0e-33 147.1 147 61.2
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 1.0e-33 147.1 149 61.1
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 1.4e-33 146.7 156 57.7
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 3.0e-33 145.6 154 56.5
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 3.0e-33 145.6 172 52.3
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 4.0e-33 145.2 152 59.9
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 4.0e-33 145.2 148 52.0
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.7e-33 144.4 150 56.0
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 5.7e-32 141.4 143 52.4
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 6.3e-31 137.9 125 61.6
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.8e-30 136.3 131 55.7
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 2.4e-30 136.0 143 54.5
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 3.1e-30 135.6 162 54.9
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 1.2e-29 133.7 161 50.9
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 5.9e-29 131.3 157 52.2
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 7.7e-29 131.0 159 53.5
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 1.7e-28 129.8 146 57.5
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 5.0e-28 128.3 123 56.9
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 1.6e-26 123.2 168 47.6
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 7.5e-24 114.4 93 64.5
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 2.8e-23 112.5 92 64.1
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 2.8e-23 112.5 127 53.5
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 1.4e-22 110.2 146 41.8
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 3.1e-22 109.0 148 43.2
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 9.1e-22 107.5 135 48.9
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 4.5e-21 105.1 90 56.7
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 7.7e-21 104.4 127 52.0
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 4.2e-19 98.6 126 46.0
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 1.2e-18 97.1 91 57.1
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 2.8e-18 95.9 119 50.4
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 8.0e-18 94.4 173 41.0
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 9.8e-16 87.4 93 54.8
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 1.4e-14 83.6 126 42.9
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 3.1e-14 82.4 150 44.0
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 2.3e-12 76.3 97 47.4
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 1.9e-11 73.2 94 45.7
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.9e-11 73.2 129 35.7
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 3.3e-11 72.4 92 48.9
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 5.6e-11 71.6 77 53.2
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 9.5e-11 70.9 98 49.0
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 4.7e-10 68.6 56 62.5
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 8.9e-09 64.3 50 66.0
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 1.5e-08 63.5 56 57.1
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 2.6e-08 62.8 96 49.0
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 5.8e-08 61.6 42 69.0
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 2.9e-07 59.3 51 56.9
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 8.3e-07 57.8 58 50.0
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 1.9e-06 56.6 42 66.7
FAN25G2302 Fragaria x ananassa HOM05D000283 ORTHO05D000358 1.9e-06 56.6 59 50.8
Sc15g0000290 Simmondsia chinensis HOM05D006233 ORTHO05D007247 1.9e-06 56.6 130 31.5


User provided reference genes

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