Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.5e-141 506.1 243 100.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 5.8e-122 441.0 244 86.5
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.2e-111 406.8 220 85.9
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 3.2e-104 382.1 209 81.8
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.2e-104 381.7 213 78.4
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.7e-102 376.3 218 78.9
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 3.1e-99 365.5 207 78.3
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 9.0e-99 364.0 209 77.5
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.5e-98 363.2 218 76.1
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 5.4e-96 354.8 220 73.2
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 6.0e-95 351.3 211 74.9
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 1.3e-94 350.1 209 74.6
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 8.7e-94 347.4 222 72.1
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.9e-93 346.3 231 68.4
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 1.3e-92 343.6 258 67.4
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 1.8e-91 339.7 217 71.4
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 9.0e-91 337.4 219 70.3
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.5e-90 336.7 239 69.0
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 5.8e-90 334.7 239 64.9
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.6e-90 334.3 209 72.7
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 5.4e-88 328.2 209 70.3
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 9.3e-88 327.4 218 69.3
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 7.9e-87 324.3 210 69.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 6.7e-86 321.2 215 66.5
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 3.3e-85 318.9 241 61.4
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 4.3e-85 318.5 223 65.5
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 5.6e-85 318.2 222 65.8
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.3e-84 317.0 222 64.4
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 2.1e-84 316.2 229 61.1
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 3.7e-84 315.5 208 65.9
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.4e-83 313.5 205 69.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 9.0e-83 310.8 245 60.4
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 5.8e-82 308.1 210 64.8
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.1e-80 303.9 206 65.0
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 4.2e-80 302.0 243 60.1
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 7.1e-80 301.2 206 66.5
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-78 297.4 198 66.2
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.3e-78 297.0 206 63.1
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 2.3e-78 296.2 200 63.0
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.4e-75 287.0 170 75.3
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 2.4e-75 286.2 250 53.6
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 4.0e-75 285.4 200 62.5
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.5e-74 283.5 216 62.5
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 3.8e-73 278.9 202 62.4
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 5.1e-70 268.5 125 92.0
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 9.7e-69 264.2 242 53.3
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.1e-67 260.8 217 56.2
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.4e-62 243.8 176 59.1
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 3.3e-61 239.2 137 80.3
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 6.3e-60 235.0 174 62.6
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 4.5e-58 228.8 124 83.1
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.3e-57 227.3 150 67.3
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 3.6e-55 219.2 204 48.5
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.8e-54 216.9 130 70.0
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 5.1e-54 215.3 124 67.7
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 9.7e-53 211.1 255 39.2
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.1e-51 206.1 142 65.5
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 9.1e-51 204.5 122 72.1
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 7.7e-50 201.4 206 49.0
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.2e-49 199.9 126 64.3
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 8.5e-49 198.0 229 41.5
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 7.2e-48 194.9 111 74.8
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 2.3e-46 189.9 110 73.6
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 8.8e-46 188.0 118 71.2
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.3e-44 184.1 103 72.8
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 5.5e-40 168.7 214 40.2
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 7.2e-40 168.3 115 71.3
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 6.1e-39 165.2 115 68.7
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 6.1e-39 165.2 98 69.4
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.5e-37 160.6 104 66.3
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.6e-37 159.8 98 67.3
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.2e-36 156.8 86 79.1
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 2.2e-36 156.8 192 37.5
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.8e-35 153.7 106 57.5
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 7.7e-34 148.3 198 38.4
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.0e-33 145.6 207 39.1
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 9.8e-29 131.3 88 73.9
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 3.7e-28 129.4 192 35.4
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.8e-28 129.0 184 37.0
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 7.7e-26 121.7 73 65.8
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.9e-25 119.8 213 36.6
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.9e-25 119.8 198 33.3
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.7e-21 105.5 113 42.5
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 7.8e-18 95.1 63 71.4
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 9.5e-16 88.2 123 40.7
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 2.3e-14 83.6 232 26.7
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 5.2e-14 82.4 58 69.0
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 1.4e-11 74.3 47 76.6
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.4e-11 74.3 73 60.3
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 9.2e-11 71.6 73 54.8
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 3.5e-10 69.7 55 60.0
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.0e-09 68.2 48 66.7
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 6.6e-09 65.5 62 58.1
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 1.1e-08 64.7 59 52.5
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 7.3e-08 62.0 109 38.5
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.8e-06 57.4 71 43.7
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.1e-06 56.6 36 69.4
unitig_0.g2249 Utricularia gibba HOM05D007543 ORTHO05D009555 3.1e-06 56.6 47 57.4


User provided reference genes

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