Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.5e-95 352.8 182 100.0
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.8e-89 332.0 177 96.6
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 2.8e-89 332.0 177 96.6
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 3.2e-85 318.5 177 91.0
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 4.7e-84 314.7 177 89.3
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 6.1e-84 314.3 178 89.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 6.1e-84 314.3 177 88.1
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.0e-83 313.5 177 89.3
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.0e-83 313.5 177 89.8
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 4.0e-83 311.6 177 89.3
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 5.2e-83 311.2 177 90.4
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 5.2e-83 311.2 177 89.8
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 1.1e-82 310.1 177 88.7
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.1e-82 310.1 177 89.3
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.1e-82 310.1 177 89.3
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.1e-82 310.1 177 88.1
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 2.6e-82 308.9 177 88.1
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 2.6e-82 308.9 177 88.1
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 2.6e-82 308.9 177 89.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 3.3e-82 308.5 177 88.7
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 7.5e-82 307.4 177 88.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 9.7e-82 307.0 177 87.6
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 9.7e-82 307.0 177 89.3
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.3e-81 306.6 176 88.1
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.7e-81 306.2 177 87.6
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 2.8e-81 305.4 177 87.6
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 3.7e-81 305.1 177 87.0
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 3.7e-81 305.1 177 87.0
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 4.8e-81 304.7 177 87.0
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 4.8e-81 304.7 177 87.0
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 6.3e-81 304.3 178 88.2
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 8.2e-81 303.9 177 86.4
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 8.2e-81 303.9 177 85.9
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 8.2e-81 303.9 177 88.7
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 1.1e-80 303.5 177 87.6
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.4e-80 303.1 179 87.2
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.4e-80 303.1 177 86.4
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.8e-80 302.8 177 85.3
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 2.4e-80 302.4 177 84.7
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 2.4e-80 302.4 177 85.9
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 2.4e-80 302.4 177 88.1
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 3.1e-80 302.0 177 86.4
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 4.1e-80 301.6 179 85.5
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 4.1e-80 301.6 177 84.2
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 4.1e-80 301.6 177 87.6
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 4.1e-80 301.6 177 85.3
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 5.3e-80 301.2 177 85.3
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 5.3e-80 301.2 177 87.6
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 7.0e-80 300.8 177 85.9
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 7.0e-80 300.8 177 88.1
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.0e-79 299.3 177 87.0
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 2.7e-79 298.9 177 83.6
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 3.5e-79 298.5 177 85.3
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 3.5e-79 298.5 177 83.6
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.5e-79 298.5 177 84.2
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 4.5e-79 298.1 177 83.1
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 5.9e-79 297.7 177 83.1
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 5.9e-79 297.7 177 84.7
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 7.7e-79 297.4 177 83.6
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 1.7e-78 296.2 177 83.6
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.7e-78 296.2 178 85.4
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 1.7e-78 296.2 177 83.6
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.7e-78 296.2 181 84.0
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 2.2e-78 295.8 178 83.7
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 2.2e-78 295.8 177 83.1
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 2.2e-78 295.8 181 84.0
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 2.9e-78 295.4 177 84.2
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 3.8e-78 295.0 178 83.7
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 6.5e-78 294.3 177 84.2
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 1.1e-77 293.5 179 83.2
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 1.9e-77 292.7 185 81.6
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.9e-77 292.7 177 84.7
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 3.2e-77 292.0 177 82.5
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.2e-77 292.0 177 84.2
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 4.2e-77 291.6 178 83.1
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 5.5e-77 291.2 177 84.2
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 7.2e-77 290.8 177 83.6
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 9.4e-77 290.4 178 80.9
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 1.2e-76 290.0 177 80.8
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.7e-76 288.9 208 74.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 4.7e-76 288.1 206 74.3
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 4.7e-76 288.1 177 83.1
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 4.7e-76 288.1 177 82.5
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 6.1e-76 287.7 177 80.2
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 6.1e-76 287.7 181 81.8
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 8.0e-76 287.3 177 82.5
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 1.0e-75 287.0 177 80.8
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.0e-75 287.0 188 79.3
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.4e-75 286.6 177 82.5
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.3e-75 285.8 208 73.1
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 5.2e-75 284.6 177 83.1
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.2e-74 283.5 177 84.2
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 1.4e-72 276.6 164 84.8
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 2.4e-72 275.8 180 76.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 5.4e-72 274.6 177 79.1
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 3.6e-68 261.9 145 91.0
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 4.7e-68 261.5 181 73.5
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.8e-67 259.6 182 75.8
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 2.3e-67 259.2 179 72.1
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 4.0e-67 258.5 177 73.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 4.0e-67 258.5 181 72.4
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 2.2e-65 252.7 177 74.6
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 3.1e-64 248.8 177 72.9
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 9.2e-64 247.3 146 87.0
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.1e-61 240.4 146 83.6
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 3.3e-61 238.8 177 72.9
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 2.0e-58 229.6 177 67.8
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 2.2e-57 226.1 200 62.0
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.4e-51 206.8 115 89.6
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 2.0e-50 203.0 199 59.8
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 6.0e-47 191.4 180 55.6
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 3.1e-43 179.1 177 58.8
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 5.8e-42 174.9 181 51.4
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 7.1e-40 167.9 186 50.0
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 3.9e-38 162.2 91 87.9
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 4.7e-36 155.2 96 79.2
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 2.3e-35 152.9 96 83.3
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 4.7e-28 128.6 83 77.1
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 1.5e-18 97.1 62 74.2
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 5.1e-14 82.0 48 79.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 9.0e-11 71.2 48 70.8
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 4.5e-10 68.9 34 88.2


User provided reference genes

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