Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 1.8e-102 375.9 190 100.0
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 4.2e-59 231.9 196 67.9
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 1.0e-57 227.3 201 65.7
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 9.6e-32 141.0 191 47.1
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 8.2e-31 137.9 192 45.3
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 5.9e-29 131.7 169 49.1
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 2.2e-28 129.8 184 47.8
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 1.9e-27 126.7 197 45.2
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 7.2e-27 124.8 198 44.9
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 9.3e-27 124.4 178 45.5
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 6.1e-26 121.7 178 45.5
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.8e-25 120.2 204 42.2
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.3e-25 119.8 194 43.8
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 3.0e-25 119.4 204 44.1
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 3.9e-25 119.0 199 42.7
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 4.3e-24 115.5 194 43.3
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 1.6e-23 113.6 185 46.5
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-22 110.5 88 70.5
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 4.1e-22 109.0 173 42.8
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 1.5e-21 107.1 185 41.6
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.0e-20 104.4 189 43.4
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 1.3e-20 104.0 195 39.0
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 8.5e-20 101.3 183 43.2
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 8.5e-20 101.3 202 37.1
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.1e-19 100.9 183 42.6
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 5.5e-19 98.6 141 47.5
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 1.6e-18 97.1 185 42.2
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.8e-17 93.6 201 40.3
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 5.1e-17 92.0 192 39.1
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.1e-16 90.9 192 39.6
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.1e-16 90.9 120 44.2
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 3.3e-16 89.4 163 42.9
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.8e-14 83.6 203 35.5
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 3.1e-14 82.8 125 49.6
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 9.1e-14 81.3 149 40.3
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 2.0e-13 80.1 145 40.0
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 3.4e-13 79.3 88 52.3
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 5.9e-13 78.6 194 34.0
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 5.9e-13 78.6 194 34.0
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.3e-12 77.4 175 32.0
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 1.7e-12 77.0 144 38.9
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 2.9e-12 76.3 218 32.1
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 3.8e-12 75.9 173 35.8
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 5.0e-12 75.5 144 41.0
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 6.5e-12 75.1 147 38.1
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 6.5e-12 75.1 250 31.6
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 6.5e-12 75.1 181 34.3
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 6.5e-12 75.1 173 35.3
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.1e-11 74.3 174 35.6
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 1.4e-11 73.9 178 36.5
THA.LOC104808976 Tarenaya hassleriana HOM05D012000 ORTHO05D013959 7.2e-11 71.6 158 34.2
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 2.7e-10 69.7 144 36.1
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 3.6e-10 69.3 127 39.4
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 3.6e-10 69.3 140 40.0
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 7.9e-10 68.2 204 34.3
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.0e-09 67.8 119 39.5
Sp7g20010 Schrenkiella parvula HOM05D012000 ORTHO05D013959 3.0e-09 66.2 140 37.1
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 5.1e-09 65.5 135 35.6
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 8.8e-09 64.7 201 31.3
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 1.5e-08 63.9 178 32.6
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 1.5e-08 63.9 186 31.7
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 2.0e-08 63.5 212 29.7
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 2.6e-08 63.2 211 30.8
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 5.7e-08 62.0 100 43.0
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 5.7e-08 62.0 120 40.0
Thhalv10026480m.g Eutrema salsugineum HOM05D012000 ORTHO05D013959 7.4e-08 61.6 143 35.7
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.3e-07 60.8 143 36.4
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 2.8e-07 59.7 131 35.9
A08p15490 Brassica napus HOM05D012000 ORTHO05D013959 3.7e-07 59.3 158 31.0
Carub.0007s1951 Capsella rubella HOM05D012000 ORTHO05D013959 4.8e-07 58.9 102 40.2
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 4.8e-07 58.9 115 34.8
AL7G32040 Arabidopsis lyrata HOM05D012000 ORTHO05D013959 6.3e-07 58.5 101 38.6
BraA08t33526Z Brassica rapa HOM05D012000 ORTHO05D013959 1.1e-06 57.8 156 31.4
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 1.1e-06 57.8 111 37.8
QL09p040324 Quercus lobata HOM05D002320 ORTHO05D002428 1.1e-06 57.8 46 65.2
BcaB03g11715 Brassica carinata HOM05D012000 ORTHO05D013959 2.4e-06 56.6 103 35.0
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 2.4e-06 56.6 109 38.5
AT4G21865 Arabidopsis thaliana HOM05D012000 ORTHO05D013959 3.1e-06 56.2 138 33.3
CARHR228620 Cardamine hirsuta HOM05D012000 ORTHO05D013959 4.1e-06 55.8 143 32.9
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 4.1e-06 55.8 129 34.1
C03p83820 Brassica napus HOM05D012000 ORTHO05D013959 7.0e-06 55.1 165 31.5
BolC3t20658H Brassica oleracea HOM05D012000 ORTHO05D013959 7.0e-06 55.1 165 31.5


User provided reference genes

Program Settings