Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-35 151.8 76 100.0
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-18 94.7 77 68.8
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-18 94.7 77 68.8
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-17 91.7 77 67.5
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-16 89.4 76 68.4
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.7e-16 89.0 76 67.1
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.7e-16 89.0 76 67.1
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.9e-16 87.8 76 68.4
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.1e-16 87.4 76 64.5
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.6e-16 86.7 78 65.4
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-15 86.3 76 65.8
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-15 85.1 76 64.5
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.3e-15 84.3 76 64.5
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 4.3e-15 84.3 68 61.8
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.3e-15 83.6 76 64.5
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.3e-15 83.6 76 61.8
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 7.3e-15 83.6 76 63.2
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 9.5e-15 83.2 78 64.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-14 82.8 76 61.8
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.2e-14 82.8 76 60.5
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-14 81.6 69 63.8
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.6e-14 81.3 76 61.8
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.6e-14 81.3 76 61.8
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 4.7e-14 80.9 76 59.2
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 4.7e-14 80.9 76 56.6
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 4.7e-14 80.9 71 62.0
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.2e-14 80.5 80 61.2
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.2e-14 80.5 80 61.2
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.1e-14 80.1 80 61.2
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-13 79.3 76 57.9
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-13 78.6 77 62.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.4e-13 78.6 76 57.9
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.4e-13 78.6 76 53.9
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.1e-13 78.2 77 62.3
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-13 78.2 75 60.0
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.0e-13 77.8 76 55.3
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 4.0e-13 77.8 75 60.0
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 5.2e-13 77.4 74 54.1
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.8e-13 77.0 76 65.8
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-13 77.0 78 60.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 6.8e-13 77.0 72 58.3
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 6.8e-13 77.0 76 52.6
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 6.8e-13 77.0 66 59.1
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 8.9e-13 76.6 77 53.2
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-12 76.3 76 53.9
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.2e-12 76.3 82 53.7
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-12 76.3 75 60.0
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.5e-12 75.9 72 56.9
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-12 75.9 75 60.0
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-12 75.9 75 58.7
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.6e-12 75.1 80 58.8
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 2.6e-12 75.1 76 55.3
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.4e-12 74.7 76 52.6
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.4e-12 74.3 78 55.1
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.4e-12 74.3 76 57.9
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-12 74.3 72 61.1
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 5.8e-12 73.9 77 51.9
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 5.8e-12 73.9 72 55.6
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 5.8e-12 73.9 72 55.6
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.9e-12 73.2 73 61.6
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 9.9e-12 73.2 77 50.6
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 9.9e-12 73.2 76 51.3
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 2.9e-11 71.6 77 49.4
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 2.9e-11 71.6 76 50.0
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.9e-11 71.6 76 51.3
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 3.8e-11 71.2 76 53.9
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 3.8e-11 71.2 75 58.7
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.9e-11 70.9 69 63.8
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 8.4e-11 70.1 59 61.0
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.4e-11 70.1 76 60.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 8.4e-11 70.1 75 52.0
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 8.4e-11 70.1 76 56.6
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 72 58.3
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 75 50.7
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.9e-10 68.9 81 49.4
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.9e-10 68.9 71 56.3
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-10 68.6 77 57.1
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 3.2e-10 68.2 76 47.4
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 4.1e-10 67.8 67 52.2
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.4e-10 67.4 73 60.3
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 7.1e-10 67.0 68 51.5
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 7.1e-10 67.0 82 53.7
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 7.1e-10 67.0 76 48.7
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 9.2e-10 66.6 77 50.6
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 9.2e-10 66.6 85 51.8
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 9.2e-10 66.6 71 53.5
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.2e-09 66.2 76 52.6
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.6e-09 65.9 68 52.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-09 65.9 75 49.3
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 2.1e-09 65.5 75 49.3
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 2.7e-09 65.1 85 50.6
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.5e-09 64.7 69 49.3
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 3.5e-09 64.7 69 52.2
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 3.5e-09 64.7 77 51.9
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 6.0e-09 63.9 83 50.6
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 6.0e-09 63.9 77 48.1
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.8e-09 63.5 79 57.0
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 7.8e-09 63.5 82 51.2
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 7.8e-09 63.5 86 48.8
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 1.0e-08 63.2 77 48.1
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.3e-08 62.8 76 43.4
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 1.7e-08 62.4 68 51.5
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-08 61.6 78 59.0
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 3.0e-08 61.6 82 48.8
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.9e-08 61.2 69 47.8
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 3.9e-08 61.2 77 48.1
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 8.7e-08 60.1 68 45.6
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 8.7e-08 60.1 77 46.8
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-07 58.9 71 56.3
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 3.3e-07 58.2 72 48.6
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 4.3e-07 57.8 74 55.4
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 7.3e-07 57.0 61 54.1
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.2e-06 56.2 71 43.7
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 2.1e-06 55.5 75 46.7
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 2.1e-06 55.5 65 46.2
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-06 55.1 78 52.6
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-06 55.1 74 52.7
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 4.7e-06 54.3 69 50.7
AUR62002340 Chenopodium quinoa HOM05D038336 ORTHO05D038978 6.2e-06 53.9 67 41.8


User provided reference genes

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