Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.8e-38 159.8 83 100.0
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-18 96.3 78 73.1
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.5e-18 94.4 81 69.1
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.9e-18 94.0 81 67.9
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.9e-18 94.0 81 67.9
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-17 92.4 81 74.1
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-17 91.7 81 74.1
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-17 90.9 81 67.9
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-16 89.7 81 72.8
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-16 89.7 77 71.4
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-16 88.6 77 70.1
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 3.2e-16 88.2 78 65.4
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.4e-16 86.7 76 69.7
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-15 85.5 81 71.6
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-15 85.5 83 62.7
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-15 85.5 81 63.0
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 4.7e-15 84.3 78 67.9
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.0e-14 81.3 78 66.7
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 4.0e-14 81.3 78 66.7
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-14 80.5 81 63.0
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-14 80.5 81 63.0
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 1.2e-13 79.7 78 55.1
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-13 79.7 78 64.1
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-13 79.7 80 60.0
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.5e-13 79.3 87 59.8
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-13 79.0 75 64.0
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-13 79.0 78 67.9
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-13 78.2 80 58.8
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.4e-13 77.8 80 62.5
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 5.7e-13 77.4 79 58.2
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.5e-13 77.0 81 63.0
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.5e-13 77.0 81 60.5
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 7.5e-13 77.0 78 55.1
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.5e-13 77.0 81 55.6
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 7.5e-13 77.0 80 62.5
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 9.8e-13 76.6 80 57.5
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 2.2e-12 75.5 81 55.6
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.7e-12 74.7 78 60.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.7e-12 74.7 80 55.0
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.7e-12 74.7 78 57.7
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 3.7e-12 74.7 79 57.0
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-12 74.7 80 56.2
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-12 74.3 81 56.8
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.3e-12 73.9 77 58.4
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.3e-12 73.9 81 64.2
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.3e-12 73.6 78 56.4
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-11 73.2 77 58.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.1e-11 73.2 77 58.4
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-11 73.2 78 59.0
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-11 73.2 80 52.5
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-11 73.2 78 60.3
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-11 72.8 78 61.5
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-11 72.8 78 52.6
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.8e-11 72.4 79 54.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-11 72.4 78 56.4
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.8e-11 72.4 84 58.3
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.4e-11 72.0 78 56.4
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 2.4e-11 72.0 83 53.0
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.4e-11 72.0 81 50.6
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 4.1e-11 71.2 84 51.2
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-11 71.2 77 57.1
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 5.4e-11 70.9 79 49.4
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 5.4e-11 70.9 77 57.1
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 7.0e-11 70.5 80 50.0
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 9.1e-11 70.1 82 52.4
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 9.1e-11 70.1 76 59.2
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 9.1e-11 70.1 78 59.0
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 1.2e-10 69.7 86 52.3
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-10 69.3 73 63.0
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-10 69.3 76 57.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 2.0e-10 68.9 78 47.4
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-10 68.9 70 61.4
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.5e-10 68.2 84 50.0
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.5e-10 68.2 82 61.0
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 3.5e-10 68.2 83 48.2
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 3.5e-10 68.2 81 48.1
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 3.5e-10 68.2 81 53.1
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.5e-10 67.8 82 51.2
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.5e-10 67.8 78 48.7
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 5.9e-10 67.4 60 63.3
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.9e-10 67.4 84 60.7
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 1.0e-09 66.6 61 57.4
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.3e-09 66.2 78 46.2
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 1.3e-09 66.2 81 46.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-09 66.2 80 55.0
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 1.3e-09 66.2 85 49.4
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.7e-09 65.9 81 50.6
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 3.8e-09 64.7 78 46.2
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 3.8e-09 64.7 83 51.8
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 3.8e-09 64.7 83 49.4
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 3.8e-09 64.7 76 56.6
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.0e-09 64.3 69 52.2
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 5.0e-09 64.3 80 55.0
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 5.0e-09 64.3 81 49.4
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 6.5e-09 63.9 78 46.2
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 8.5e-09 63.5 75 56.0
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 1.1e-08 63.2 81 53.1
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.5e-08 62.8 82 47.6
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.5e-08 62.0 78 44.9
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.5e-08 62.0 81 49.4
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-08 61.2 83 60.2
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 4.2e-08 61.2 81 48.1
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 7.2e-08 60.5 73 45.2
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 7.2e-08 60.5 69 50.7
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 9.4e-08 60.1 78 47.4
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 9.4e-08 60.1 75 53.3
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.7e-07 58.5 73 54.8
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 3.6e-07 58.2 84 44.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 3.6e-07 58.2 81 46.9
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.7e-07 57.8 83 60.2
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.0e-06 56.6 75 46.7
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 1.0e-06 56.6 81 45.7
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-06 56.2 81 55.6
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 2.3e-06 55.5 70 42.9
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 2.3e-06 55.5 84 42.9
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 57 54.4
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.0e-06 54.7 88 42.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 5.2e-06 54.3 78 43.6
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 5.2e-06 54.3 81 44.4
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 6.8e-06 53.9 81 40.7
MELO3C027180.2 Cucumis melo HOM05D064062 ORTHO05D007460 8.8e-06 53.5 83 43.4


User provided reference genes

Program Settings