Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 1.2e-214 749.6 379 100.0
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 7.0e-183 644.0 377 85.7
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 5.7e-177 624.4 391 80.8
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.4e-170 603.2 371 80.6
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 1.3e-165 586.6 379 79.4
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 4.4e-161 571.6 357 81.5
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 5.8e-161 571.2 383 76.0
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 2.2e-160 569.3 382 76.2
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 2.2e-160 569.3 379 78.4
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 3.7e-160 568.5 381 76.4
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 2.4e-159 565.8 357 80.7
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 4.1e-159 565.1 376 76.9
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 7.0e-159 564.3 368 78.8
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 7.0e-159 564.3 379 74.9
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 6.0e-158 561.2 376 76.1
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.3e-157 560.1 358 79.3
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 2.3e-157 559.3 356 78.4
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 1.5e-156 556.6 381 75.1
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 4.3e-156 555.1 381 73.8
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 3.6e-155 552.0 358 77.9
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 8.1e-155 550.8 357 76.2
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 1.1e-154 550.4 378 73.3
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 4.0e-154 548.5 357 76.8
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 8.9e-154 547.4 376 73.1
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 3.4e-153 545.4 371 73.3
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 4.4e-153 545.0 365 75.1
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.2e-152 542.7 359 76.0
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 3.7e-152 542.0 365 74.8
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 6.4e-152 541.2 382 73.0
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 8.3e-152 540.8 377 72.4
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 8.3e-152 540.8 358 76.3
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.9e-151 539.7 395 71.4
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 3.2e-151 538.9 376 70.7
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 1.2e-150 537.0 414 67.4
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.6e-150 536.6 357 74.8
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 4.6e-150 535.0 368 73.6
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 4.6e-150 535.0 415 67.2
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 6.0e-150 534.6 360 77.8
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 3.9e-149 531.9 381 73.2
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.9e-148 529.6 381 73.0
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 7.3e-148 527.7 362 73.8
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.6e-147 526.6 373 70.0
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 1.6e-147 526.6 367 73.3
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 1.6e-147 526.6 362 73.8
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.1e-147 526.2 380 72.6
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 2.1e-147 526.2 360 75.0
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 5.2e-146 521.5 366 70.8
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.2e-146 521.5 393 70.0
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.5e-145 520.0 316 82.3
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 1.5e-145 520.0 385 68.1
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 7.6e-145 517.7 356 75.8
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 2.2e-144 516.2 318 77.7
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 3.8e-144 515.4 320 78.4
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 3.8e-144 515.4 326 78.5
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 4.9e-144 515.0 358 73.5
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 1.9e-143 513.1 358 73.2
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 2.4e-143 512.7 380 68.9
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 3.2e-143 512.3 358 72.9
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 4.1e-143 511.9 361 72.9
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 7.1e-143 511.1 357 72.5
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 7.1e-143 511.1 320 78.1
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 7.1e-143 511.1 320 77.8
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 6.0e-142 508.1 377 70.3
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 1.3e-141 506.9 355 73.2
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 1.3e-141 506.9 358 72.1
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.7e-141 506.5 396 68.2
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 2.3e-141 506.1 358 72.9
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 3.0e-141 505.8 380 68.2
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 3.9e-141 505.4 393 67.2
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 3.9e-141 505.4 356 71.9
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 5.1e-141 505.0 370 69.7
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 8.6e-141 504.2 378 70.1
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 1.1e-140 503.8 360 71.9
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 1.5e-140 503.4 356 71.6
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 5.6e-140 501.5 312 78.2
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 1.2e-139 500.4 366 70.8
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 2.8e-139 499.2 327 76.8
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 3.6e-139 498.8 371 69.5
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 6.2e-139 498.0 317 77.6
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.1e-138 495.7 318 74.5
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 4.0e-138 495.4 359 69.1
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 4.0e-138 495.4 357 68.3
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 3.4e-137 492.3 382 68.3
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 7.6e-137 491.1 322 75.8
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 2.2e-136 489.6 370 67.0
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 3.2e-135 485.7 370 67.0
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 5.4e-135 485.0 360 69.4
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 9.3e-135 484.2 322 74.8
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-134 482.6 358 69.6
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 3.5e-134 482.3 291 80.1
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 6.0e-134 481.5 322 74.2
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 6.0e-134 481.5 322 74.2
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 6.0e-134 481.5 292 80.1
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 6.0e-134 481.5 323 73.1
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 8.7e-133 477.6 283 83.4
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 7.3e-132 474.6 427 61.1
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 3.6e-131 472.2 318 74.2
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.4e-130 470.3 350 71.4
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 4.0e-130 468.8 325 72.3
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 3.4e-129 465.7 317 72.2
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 3.5e-126 455.7 321 70.4
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.1e-123 444.5 257 85.6
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.5e-121 440.3 257 82.9
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 6.0e-118 428.3 244 84.4
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 2.1e-110 403.3 376 56.4
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 2.7e-110 402.9 382 58.6
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 3.1e-106 389.4 241 79.3
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 4.5e-105 385.6 260 73.5
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 9.3e-103 377.9 319 60.5
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 6.1e-102 375.2 375 56.3
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 1.1e-100 370.9 297 66.0
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 3.3e-100 369.4 387 55.0
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 1.7e-99 367.1 306 60.8
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.4e-98 364.0 305 62.3
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 4.1e-98 362.5 326 56.1
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 5.7e-92 342.0 196 84.7
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.0e-89 333.6 365 52.1
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.7e-88 330.5 282 62.8
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 5.0e-88 328.9 362 48.6
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 8.8e-85 318.2 283 58.0
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.2e-83 311.6 198 78.3
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 2.7e-78 296.6 178 80.3
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.5e-71 274.2 192 71.4
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.3e-69 266.9 191 70.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 3.0e-69 266.5 365 39.5
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 9.1e-66 255.0 198 68.2
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 5.5e-63 245.7 164 75.0
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 7.2e-63 245.4 171 73.1
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.8e-62 243.4 171 74.9
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.8e-61 238.8 201 62.2
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 1.3e-59 234.6 331 40.5
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 7.3e-55 218.8 348 39.9
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.1e-50 204.9 165 64.8
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.4e-50 203.8 154 64.3
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 9.2e-50 201.8 298 38.3
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.2e-49 201.4 123 75.6
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.7e-49 200.3 171 58.5
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 1.9e-47 194.1 259 42.9
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 4.0e-45 186.4 158 63.9
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 6.4e-43 179.1 350 34.0
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.6e-36 157.1 129 60.5
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 1.3e-35 154.8 93 78.5
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 6.6e-32 142.5 94 74.5
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 8.9e-29 132.1 86 74.4
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 4.2e-26 123.2 69 81.2
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.0e-24 118.6 183 44.3
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 3.6e-22 110.2 71 73.2
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 2.2e-19 100.9 77 64.9
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.1e-10 72.0 39 87.2


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