Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.9e-33 145.2 72 100.0
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 84.7
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 84.7
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 84.7
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 84.7
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.1e-28 129.4 72 87.5
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.4e-28 129.0 72 84.7
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 5.5e-28 127.1 71 85.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-27 125.9 72 83.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.2e-27 125.9 72 81.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.2e-27 125.9 72 83.3
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 81.9
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 81.9
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 83.3
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 81.9
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 83.3
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 84.7
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 81.9
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 80.6
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 2.7e-27 124.8 72 81.9
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 3.5e-27 124.4 72 81.9
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 80.6
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 80.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 4.6e-27 124.0 71 80.3
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.0e-27 123.6 72 79.2
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.0e-27 123.6 72 79.2
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 7.9e-27 123.2 72 81.9
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 7.9e-27 123.2 70 81.4
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 84.7
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 84.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.3e-26 121.7 72 81.9
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 77.8
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 83.3
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 83.3
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 76.4
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 80.6
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 6.7e-26 120.2 70 81.4
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 80.6
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 81.9
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 77.8
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.5e-25 119.0 70 80.0
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 80.6
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 79.2
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 77.8
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 7.4e-25 116.7 73 78.1
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 75.0
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 76.4
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.3e-24 115.9 73 79.5
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 77.8
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 2.1e-24 115.2 68 77.9
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.8e-24 114.8 65 86.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 4.8e-24 114.0 69 75.4
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.8e-24 114.0 82 70.7
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 8.2e-24 113.2 68 75.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 8.2e-24 113.2 68 75.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 8.2e-24 113.2 68 76.5
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 75.0
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.1e-23 112.8 75 74.7
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.4e-23 112.5 68 73.5
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 2.4e-23 111.7 71 76.1
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 3.1e-23 111.3 69 69.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 3.1e-23 111.3 64 84.4
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 4.0e-23 110.9 68 75.0
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 4.0e-23 110.9 68 75.0
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 4.0e-23 110.9 69 75.4
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 4.0e-23 110.9 66 77.3
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 5.3e-23 110.5 72 73.6
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 9.0e-23 109.8 72 72.2
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.2e-22 109.4 68 75.0
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.2e-22 109.4 69 72.5
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 2.6e-22 108.2 68 72.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 4.5e-22 107.5 69 71.0
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 5.8e-22 107.1 68 70.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 7.6e-22 106.7 71 76.1
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.3e-21 105.9 85 67.1
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.7e-21 105.5 69 69.6
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 2.9e-21 104.8 65 72.3
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 3.8e-21 104.4 70 74.3
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 8.4e-21 103.2 88 64.8
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.1e-20 102.8 101 56.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 9.3e-20 99.8 67 71.6
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 9.3e-20 99.8 72 72.2
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 3.5e-19 97.8 72 72.2
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 6.1e-19 97.1 70 62.9
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.3e-18 95.9 70 71.4
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.0e-18 94.7 72 65.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.1e-17 92.8 61 68.9
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.9e-17 92.0 137 42.3
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.5e-17 91.7 131 45.0
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 3.3e-17 91.3 52 84.6
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 9.0e-15 83.2 50 80.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.5e-14 82.4 51 70.6
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.2e-13 78.6 166 34.3
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 4.2e-12 74.3 39 82.1
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 9.4e-12 73.2 42 78.6
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.6e-11 72.4 68 54.4
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.6e-11 72.4 41 82.9
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.1e-11 72.0 42 76.2
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 6.1e-11 70.5 42 76.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 7.9e-11 70.1 42 76.2
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.0e-10 69.7 42 71.4
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.4e-10 69.3 52 57.7
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.0e-10 68.2 60 56.7
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 2.0e-09 65.5 42 73.8
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.3e-09 64.3 41 73.2
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 5.7e-09 63.9 35 82.9
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.7e-09 63.9 39 69.2
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 2.8e-08 61.6 36 80.6
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 6.9e-07 57.0 47 53.2
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.2e-06 56.2 30 83.3
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 1.2e-06 56.2 31 80.6
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 1.5e-06 55.8 35 71.4
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 3.4e-06 54.7 66 45.5
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 7.7e-06 53.5 61 42.6


User provided reference genes

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