Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G087100 Carya illinoinensis HOM05D007701 ORTHO05D006440 8.2e-86 320.5 175 100.0
Haze_01050 Corylus avellana HOM05D007701 ORTHO05D006440 6.6e-35 151.4 128 71.9
Cfa015502 Carpinus fangiana HOM05D007701 ORTHO05D006440 3.3e-34 149.1 140 69.3
CiPaw.01G153900 Carya illinoinensis HOM05D007701 ORTHO05D006440 4.3e-34 148.7 141 68.8
QL12p038321 Quercus lobata HOM05D007701 ORTHO05D006440 4.3e-26 122.1 144 58.3
Duzib151G0788 Durio zibethinus HOM05D007701 ORTHO05D006440 2.2e-22 109.8 145 54.5
Duzib212G0358 Durio zibethinus HOM05D007701 ORTHO05D006440 4.1e-21 105.5 142 54.2
Manes.03G190500 Manihot esculenta HOM05D007701 ORTHO05D006440 1.6e-20 103.6 160 47.5
Thecc.04G276200 Theobroma cacao HOM05D007701 ORTHO05D006440 1.6e-20 103.6 143 53.8
Glyma.15G098700 Glycine max HOM05D007701 ORTHO05D006440 3.9e-19 99.0 146 49.3
Dinv44434 Davidia involucrata HOM05D007701 ORTHO05D006440 1.5e-18 97.1 121 54.5
Phvul.006G160600 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 2.5e-18 96.3 137 51.1
Potri.010G031700 Populus trichocarpa HOM05D007701 ORTHO05D006440 3.3e-18 95.9 134 50.0
Glyma.13G214500 Glycine max HOM05D007701 ORTHO05D006440 9.5e-18 94.4 151 46.4
Lalb_Chr15g0087071 Lupinus albus HOM05D007701 ORTHO05D006440 4.7e-17 92.0 135 53.3
Ca_00580_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 8.1e-17 91.3 143 47.6
RcHm_v2.0_Chr4g0420861 Rosa chinensis HOM05D016333 ORTHO05D006440 1.1e-16 90.9 133 53.4
QL06p007247 Quercus lobata HOM05D007701 ORTHO05D006440 6.8e-16 88.2 117 54.7
Dinv38332 Davidia involucrata HOM05D007701 ORTHO05D006440 3.4e-15 85.9 125 48.0
Potri.008G195700 Populus trichocarpa HOM05D007701 ORTHO05D006440 2.9e-14 82.8 141 46.8
Lalb_Chr20g0118191 Lupinus albus HOM05D007701 ORTHO05D006440 3.7e-14 82.4 140 47.1
Medtr2g020370 Medicago truncatula HOM05D007701 ORTHO05D006440 6.4e-14 81.6 137 43.1
FvH4_4g17060 Fragaria vesca HOM05D016333 ORTHO05D006440 8.4e-14 81.3 132 50.0
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 1.4e-13 80.5 126 48.4
TPR.G1519 Trifolium pratense HOM05D007701 ORTHO05D006440 1.4e-13 80.5 147 45.6
COL.COLO4_13938 Corchorus olitorius HOM05D007701 ORTHO05D006440 7.1e-13 78.2 126 46.0
Prupe.1G143000 Prunus persica HOM05D016333 ORTHO05D006440 9.2e-13 77.8 133 47.4
TWI09G0131 Tripterygium wilfordii HOM05D007701 ORTHO05D006440 2.1e-12 76.6 126 46.8
FAN12G2470 Fragaria x ananassa HOM05D016333 ORTHO05D006440 2.7e-12 76.3 132 48.5
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 3.5e-12 75.9 141 46.8
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 3.5e-12 75.9 137 48.2
LjContig00389g0004887 Lotus japonicus HOM05D007701 ORTHO05D006440 7.8e-12 74.7 105 52.4
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 2.3e-11 73.2 116 50.9
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 3.9e-11 72.4 151 41.7
Oeu021618.1 Olea europaea HOM05D007701 ORTHO05D006440 6.6e-11 71.6 140 45.7
Peaxi162Scf00041g01724 Petunia axillaris HOM05D020366 ORTHO05D006440 1.1e-10 70.9 119 45.4
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 7.3e-10 68.2 136 41.2
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 1.2e-09 67.4 110 45.5
FAN12G2150 Fragaria x ananassa HOM05D016333 ORTHO05D006440 1.6e-09 67.0 115 47.0
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 1.6e-09 67.0 110 45.5
FAN07G1026 Fragaria x ananassa HOM05D016333 ORTHO05D006440 2.1e-09 66.6 115 47.0
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 3.6e-09 65.9 137 42.3
FAN17G0507 Fragaria x ananassa HOM05D016333 ORTHO05D006440 4.7e-09 65.5 109 50.5
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 4.7e-09 65.5 137 42.3
THA.LOC104802728 Tarenaya hassleriana HOM05D012083 ORTHO05D006440 1.4e-08 63.9 124 41.1
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 1.8e-08 63.5 140 41.4
Sopen00g012820 Solanum pennellii HOM05D020366 ORTHO05D006440 1.8e-08 63.5 132 46.2
Nitab4.5_0003631g0050 Nicotiana tabacum HOM05D020366 ORTHO05D006440 2.4e-08 63.2 100 55.0
Solyc04g074167.1 Solanum lycopersicum HOM05D020366 ORTHO05D006440 4.0e-08 62.4 132 45.5
Nitab4.5_0000232g0150 Nicotiana tabacum HOM05D020366 ORTHO05D006440 5.2e-08 62.0 103 52.4
ClCG06G005430 Citrullus lanatus HOM05D007701 ORTHO05D006440 8.9e-08 61.2 110 47.3
CANSAT78G1473 Cannabis sativa HOM05D007701 ORTHO05D006440 1.2e-07 60.8 141 42.6
CAN.G101.7 Capsicum annuum HOM05D020366 ORTHO05D006440 1.2e-07 60.8 136 44.9
Sabra08G0148800 Salix brachista HOM05D007701 ORTHO05D006440 2.0e-07 60.1 144 38.9
Prupe.8G252700 Prunus persica HOM05D007701 ORTHO05D006440 2.6e-07 59.7 128 39.8
Psat1g187000 Pisum sativum HOM05D007701 ORTHO05D006440 4.4e-07 58.9 131 39.7
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 4.4e-07 58.9 115 43.5
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 5.8e-07 58.5 125 44.0
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 5.8e-07 58.5 132 42.4
Sc19g0004910 Simmondsia chinensis HOM05D007701 ORTHO05D006440 1.3e-06 57.4 109 39.4
BcaB08g36652 Brassica carinata HOM05D012083 ORTHO05D006440 1.7e-06 57.0 91 45.1
Migut.G00219 Erythranthe guttata HOM05D007701 ORTHO05D006440 1.7e-06 57.0 106 45.3
BcaC04g18652 Brassica carinata HOM05D012083 ORTHO05D006440 2.2e-06 56.6 139 39.6
BcaC04g18653 Brassica carinata HOM05D012083 ORTHO05D006440 2.2e-06 56.6 139 39.6
C09p57760 Brassica napus HOM05D012083 ORTHO05D006440 2.2e-06 56.6 139 39.6
BolC9t58646H Brassica oleracea HOM05D012083 ORTHO05D006440 2.2e-06 56.6 139 39.6
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 2.2e-06 56.6 125 43.2
CDE05G2550 Ceratophyllum demersum HOM05D007701 ORTHO05D006440 2.2e-06 56.6 73 49.3
MELO3C021367.2 Cucumis melo HOM05D007701 ORTHO05D006440 2.2e-06 56.6 102 46.1
CsaV3_6G005680 Cucumis sativus L. HOM05D007701 ORTHO05D006440 2.2e-06 56.6 102 46.1
A10p20870 Brassica napus HOM05D012083 ORTHO05D006440 8.4e-06 54.7 63 54.0
BraA10t44152Z Brassica rapa HOM05D012083 ORTHO05D006440 8.4e-06 54.7 113 46.9
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 8.4e-06 54.7 108 44.4


User provided reference genes

Program Settings