Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 6.6e-246 853.6 430 100.0
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.3e-180 636.7 399 78.9
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 1.7e-172 609.8 432 72.9
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 5.0e-161 571.6 401 71.3
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 1.6e-159 566.6 463 66.1
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 9.8e-157 557.4 403 71.0
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 1.2e-154 550.4 402 69.9
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 1.2e-151 540.4 413 66.3
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 3.0e-150 535.8 400 68.5
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.5e-144 516.9 403 66.5
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 1.6e-143 513.5 395 66.6
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 4.7e-143 511.9 395 65.6
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 5.2e-142 508.4 413 63.2
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.2e-141 507.3 423 63.1
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 1.5e-141 506.9 395 63.8
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 9.8e-141 504.2 389 66.1
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.9e-140 502.7 408 62.7
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 8.3e-140 501.1 397 63.0
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.6e-138 496.9 408 64.0
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 2.0e-138 496.5 421 59.4
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 3.5e-138 495.7 395 63.8
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 4.6e-138 495.4 325 72.6
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 1.3e-137 493.8 395 63.0
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.7e-137 493.4 402 61.4
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 5.0e-137 491.9 399 63.2
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.3e-136 489.2 415 62.2
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 3.3e-136 489.2 394 61.2
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.6e-135 486.9 397 61.2
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 2.1e-135 486.5 395 61.8
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 8.0e-135 484.6 395 62.8
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 8.0e-135 484.6 343 67.1
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 1.4e-134 483.8 401 62.1
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 1.4e-134 483.8 390 62.6
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 2.3e-134 483.0 390 62.8
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 6.8e-134 481.5 323 71.2
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 6.8e-134 481.5 326 72.1
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.3e-132 477.2 401 61.3
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 3.7e-132 475.7 395 61.0
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 5.4e-131 471.9 414 58.7
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 7.0e-131 471.5 399 60.4
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 9.2e-131 471.1 375 64.5
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 9.2e-131 471.1 395 61.0
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.2e-130 470.7 411 58.6
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 3.3e-128 462.6 326 66.9
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 9.5e-128 461.1 410 58.0
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.2e-127 460.7 397 57.7
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.2e-127 460.7 400 58.8
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.1e-126 457.6 410 57.6
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.4e-126 457.2 397 56.9
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 4.0e-126 455.7 414 56.8
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.6e-125 453.0 408 57.4
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 4.4e-125 452.2 384 59.4
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 7.5e-125 451.4 404 55.2
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 1.3e-124 450.7 404 55.4
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 4.9e-124 448.7 396 57.1
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 4.9e-124 448.7 399 57.6
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 4.9e-124 448.7 396 57.1
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 3.2e-123 446.0 326 68.4
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 5.4e-123 445.3 327 63.3
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 7.1e-123 444.9 400 56.0
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 9.2e-123 444.5 353 60.6
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 9.2e-123 444.5 361 59.8
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.2e-122 444.1 401 56.4
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 2.1e-122 443.4 397 55.9
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 2.1e-122 443.4 402 55.0
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 2.7e-122 443.0 410 56.1
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 2.7e-122 443.0 411 56.2
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 3.5e-122 442.6 404 56.9
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 3.5e-122 442.6 306 67.6
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 4.6e-122 442.2 301 68.4
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 6.0e-122 441.8 401 55.9
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 1.0e-121 441.0 404 55.2
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.3e-121 439.9 403 55.1
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 3.0e-121 439.5 326 63.5
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 5.1e-121 438.7 408 55.4
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 1.9e-120 436.8 395 56.7
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.3e-120 436.0 410 55.6
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 2.8e-119 433.0 329 62.0
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 3.6e-119 432.6 397 56.4
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 8.1e-119 431.4 334 66.5
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 1.8e-118 430.3 320 63.4
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.5e-117 427.2 407 53.6
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 9.9e-117 424.5 412 54.1
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.4e-115 419.9 395 53.9
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.4e-115 418.7 332 64.5
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 7.1e-115 418.3 320 60.6
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.6e-114 417.2 399 52.9
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 2.1e-114 416.8 392 52.6
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.3e-113 413.3 389 54.5
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 8.7e-113 411.4 321 62.0
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 5.6e-112 408.7 307 61.2
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 3.6e-111 406.0 317 64.0
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 7.6e-109 398.3 389 54.0
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 7.6e-109 398.3 360 55.3
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.2e-108 396.7 412 53.4
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 4.2e-107 392.5 407 51.4
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 2.7e-106 389.8 391 52.7
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.9e-104 383.6 315 57.1
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 4.3e-104 382.5 400 50.8
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 6.2e-103 378.6 362 51.9
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.4e-102 377.5 385 51.9
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 2.4e-102 376.7 394 50.5
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 3.3e-96 356.3 318 54.1
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 4.0e-94 349.4 272 64.3
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 9.6e-88 328.2 367 49.6
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 1.3e-87 327.8 311 54.7
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 2.1e-87 327.0 468 42.1
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 3.7e-87 326.2 306 53.6
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 1.8e-86 323.9 280 58.6
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 3.5e-82 309.7 281 57.3
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.3e-81 307.8 230 61.7
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 5.1e-81 305.8 398 46.0
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 5.9e-77 292.4 277 53.4
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 6.1e-74 282.3 351 47.9
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 2.6e-61 240.4 282 50.7
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 5.7e-56 222.6 267 45.3
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 9.4e-43 178.7 123 65.0
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 8.0e-42 175.6 133 60.9
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 1.8e-41 174.5 262 39.7
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 9.8e-40 168.7 122 69.7
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 9.1e-38 162.2 181 44.8
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 2.9e-36 157.1 323 30.7
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 6.6e-36 156.0 319 31.0
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 2.3e-28 131.0 76 73.7
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 3.9e-28 130.2 102 66.7
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 2.3e-25 120.9 247 36.4
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 1.3e-23 115.2 150 38.7
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 3.7e-23 113.6 217 32.7
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.9e-22 111.3 88 63.6
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 2.7e-21 107.5 91 58.2
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.7e-21 107.5 68 67.6
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 6.0e-21 106.3 248 29.0
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 3.0e-20 104.0 362 24.9
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 1.6e-18 98.2 111 46.8
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 2.2e-15 87.8 68 60.3
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 7.1e-14 82.8 71 63.4
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 2.6e-08 64.3 307 21.5
Eucgr.H03758 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.2e-07 61.2 40 60.0


User provided reference genes

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