Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.0e-45 186.4 192 100.0
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 4.4e-24 115.5 132 53.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 1.7e-20 103.6 133 78.2
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.1e-19 100.9 133 51.1
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.5e-19 100.5 130 76.9
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.9e-19 100.1 130 70.0
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.9e-19 100.1 130 70.0
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 2.5e-19 99.8 129 76.0
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 3.3e-19 99.4 130 68.5
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 7.2e-19 98.2 130 73.1
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 9.5e-19 97.8 130 73.8
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 9.5e-19 97.8 130 73.8
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.2e-18 97.4 130 77.7
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 1.4e-17 94.0 133 69.2
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 1.4e-17 94.0 130 80.8
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 6.8e-17 91.7 130 77.7
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 8.9e-17 91.3 133 72.9
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 8.9e-17 91.3 133 72.9
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.5e-16 90.5 136 76.5
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.6e-16 89.7 133 73.7
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 2.6e-16 89.7 128 76.6
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 3.4e-16 89.4 130 70.0
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 4.4e-16 89.0 127 75.6
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 5.7e-16 88.6 128 77.3
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 7.5e-16 88.2 117 82.1
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 1.3e-15 87.4 120 76.7
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.2e-15 86.7 132 72.0
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.8e-15 86.3 130 66.9
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.7e-15 85.9 131 64.1
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 1.1e-14 84.3 130 71.5
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.8e-14 83.6 128 77.3
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 3.1e-14 82.8 130 73.1
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 4.1e-14 82.4 130 62.3
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 1.2e-13 80.9 132 75.0
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.2e-13 80.9 121 75.2
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.6e-13 80.5 134 70.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 2.0e-13 80.1 128 39.8
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.7e-13 79.7 127 77.2
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.7e-13 79.7 130 70.0
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 3.5e-13 79.3 131 64.9
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.5e-13 79.0 109 72.5
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.5e-13 79.0 128 74.2
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 5.9e-13 78.6 128 70.3
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 7.8e-13 78.2 51 74.5
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 7.8e-13 78.2 120 75.0
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.8e-13 78.2 109 69.7
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 7.8e-13 78.2 130 61.5
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.9e-12 76.3 132 68.9
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 3.8e-12 75.9 113 76.1
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 6.6e-12 75.1 123 75.6
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.6e-12 75.1 124 74.2
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.1e-11 74.3 124 75.8
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.1e-11 74.3 124 75.8
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.5e-11 73.9 132 65.2
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 2.5e-11 73.2 107 81.3
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 2.5e-11 73.2 131 73.3
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 2.5e-11 73.2 116 75.9
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 4.3e-11 72.4 131 73.3
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 5.6e-11 72.0 111 71.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 1.6e-10 70.5 133 71.4
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.6e-10 70.5 129 55.8
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.1e-10 70.1 145 66.9
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 2.8e-10 69.7 54 70.4
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 3.6e-10 69.3 132 68.2
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 8.0e-10 68.2 128 71.9
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 1.0e-09 67.8 128 71.9
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 1.4e-09 67.4 132 68.2
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.8e-09 67.0 63 61.9
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.8e-09 67.0 119 66.4
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-09 67.0 132 39.4
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.3e-09 66.6 131 38.9
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 3.1e-09 66.2 131 57.3
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 3.1e-09 66.2 121 75.2
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 4.0e-09 65.9 131 67.2
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 4.0e-09 65.9 131 68.7
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 8.9e-09 64.7 51 70.6
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 2.0e-08 63.5 133 66.9
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 2.0e-08 63.5 129 66.7
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.6e-08 63.2 145 66.2
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 3.4e-08 62.8 111 75.7
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 4.4e-08 62.4 128 38.3
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 4.4e-08 62.4 126 73.0
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 4.4e-08 62.4 126 49.2
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 5.8e-08 62.0 50 64.0
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 5.8e-08 62.0 110 60.0
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 7.5e-08 61.6 127 38.6
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 1.3e-07 60.8 163 55.8
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 1.7e-07 60.5 129 65.9
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 1.7e-07 60.5 120 73.3
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 2.9e-07 59.7 128 65.6
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 2.9e-07 59.7 46 63.0
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 3.7e-07 59.3 48 70.8
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 4.9e-07 58.9 54 61.1
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 4.9e-07 58.9 127 70.9
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 8.3e-07 58.2 126 72.2
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 8.3e-07 58.2 160 50.0
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 3.2e-06 56.2 126 66.7
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 9.2e-06 54.7 56 55.4


User provided reference genes

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