Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.2e-56 223.0 115 100.0
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 7.3e-43 177.2 113 77.0
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 1.4e-41 172.9 112 78.6
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.4e-41 172.9 114 77.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.4e-41 172.2 114 79.8
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.1e-41 171.8 113 75.2
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 3.1e-41 171.8 112 79.5
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 6.9e-41 170.6 114 73.7
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.5e-40 169.5 114 74.6
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.0e-40 169.1 113 75.2
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.4e-40 168.3 114 73.7
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 4.5e-40 167.9 113 74.3
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 9.9e-40 166.8 110 74.5
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.3e-39 166.4 110 75.5
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.7e-39 166.0 114 74.6
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.8e-39 164.9 112 74.1
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 4.9e-39 164.5 104 76.9
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 4.9e-39 164.5 114 73.7
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 6.4e-39 164.1 114 71.9
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 8.4e-39 163.7 112 71.4
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.1e-38 163.3 111 72.1
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.1e-38 163.3 107 76.6
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 1.4e-38 162.9 114 71.9
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 1.4e-38 162.9 110 76.4
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.4e-38 162.9 114 71.1
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.9e-38 162.5 110 75.5
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 2.4e-38 162.2 113 72.6
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.4e-38 162.2 114 71.9
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 3.2e-38 161.8 114 71.9
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 4.2e-38 161.4 114 70.2
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.2e-37 159.8 114 71.1
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 1.2e-37 159.8 114 71.1
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.2e-37 159.8 103 75.7
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 1.6e-37 159.5 113 73.5
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 2.1e-37 159.1 114 72.8
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 2.1e-37 159.1 113 72.6
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.5e-37 158.3 114 68.4
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 3.5e-37 158.3 114 71.1
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 4.6e-37 157.9 114 69.3
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 4.6e-37 157.9 110 72.7
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 71.1
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 69.3
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 6.0e-37 157.5 113 69.9
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 7.9e-37 157.1 114 70.2
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 7.9e-37 157.1 113 68.1
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.0e-36 156.8 113 70.8
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.8e-36 156.0 113 69.9
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 2.3e-36 155.6 113 70.8
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.3e-36 155.6 113 69.0
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 3.0e-36 155.2 113 69.0
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 3.0e-36 155.2 112 68.8
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 3.9e-36 154.8 113 67.3
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.1e-36 154.5 114 68.4
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.1e-36 154.5 114 68.4
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 8.7e-36 153.7 113 66.4
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.5e-35 152.9 112 70.5
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 1.5e-35 152.9 113 66.4
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.5e-35 152.9 105 71.4
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 2.5e-35 152.1 113 65.5
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 2.5e-35 152.1 113 66.4
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.5e-35 152.1 113 66.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 2.5e-35 152.1 113 66.4
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 2.5e-35 152.1 113 66.4
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 3.3e-35 151.8 114 66.7
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 3.3e-35 151.8 105 74.3
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 4.3e-35 151.4 113 66.4
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 7.4e-35 150.6 113 65.5
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 7.4e-35 150.6 110 69.1
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.3e-34 149.8 113 64.6
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.3e-34 149.8 107 68.2
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.3e-34 149.8 111 68.5
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.6e-34 149.4 101 73.3
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.7e-34 148.3 114 65.8
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 4.8e-34 147.9 97 78.4
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 6.2e-34 147.5 107 70.1
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 8.1e-34 147.1 106 66.0
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 1.4e-33 146.4 114 64.9
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 3.1e-33 145.2 114 63.2
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 5.3e-33 144.4 102 71.6
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 9.0e-33 143.7 97 74.2
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 9.0e-33 143.7 97 73.2
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 9.0e-33 143.7 108 62.0
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 9.0e-33 143.7 113 69.0
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 9.0e-33 143.7 107 67.3
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.4e-32 141.7 139 56.1
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 5.8e-32 141.0 106 65.1
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 7.6e-32 140.6 114 63.2
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 7.6e-32 140.6 113 61.9
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.7e-31 139.4 105 70.5
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.7e-31 139.4 110 66.4
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.7e-31 139.4 97 73.2
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.9e-31 138.7 104 67.3
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 8.4e-31 137.1 102 66.7
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.1e-30 136.7 108 61.1
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 1.1e-30 136.7 97 70.1
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.1e-30 136.7 100 70.0
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.1e-30 136.7 104 65.4
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.5e-30 135.6 97 69.1
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 3.2e-30 135.2 104 65.4
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 5.5e-30 134.4 106 65.1
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 5.5e-30 134.4 104 64.4
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 7.1e-30 134.0 99 65.7
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 2.1e-29 132.5 109 60.6
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 2.7e-29 132.1 90 74.4
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 4.6e-29 131.3 96 68.8
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 6.0e-29 131.0 115 56.5
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 7.9e-29 130.6 89 75.3
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 1.0e-28 130.2 107 64.5
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 1.3e-28 129.8 89 71.9
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.8e-28 129.4 97 66.0
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 8.7e-28 127.1 95 67.4
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 1.1e-27 126.7 93 68.8
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 1.9e-27 125.9 96 65.6
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 3.3e-27 125.2 97 67.0
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.3e-26 123.2 94 63.8
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 1.3e-26 123.2 97 64.9
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 1.3e-26 123.2 94 63.8
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 2.1e-26 122.5 103 61.2
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 4.8e-26 121.3 94 64.9
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.8e-26 121.3 93 65.6
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 1.4e-25 119.8 119 52.9
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 3.1e-25 118.6 98 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.6e-24 115.5 103 55.3
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 3.4e-24 115.2 101 56.4
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 5.9e-24 114.4 102 57.8
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 7.2e-22 107.5 113 48.7
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.1e-21 105.9 93 58.1
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 6.3e-18 94.4 74 67.6
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.8e-17 92.8 102 51.0
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.5e-16 89.7 70 67.1
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 6.5e-15 84.3 79 57.0
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 4.2e-14 81.6 103 47.6
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.6e-13 79.7 53 77.4
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.1e-11 73.6 81 53.1
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.7e-10 69.7 65 55.4
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 8.2e-10 67.4 109 38.5
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.4e-08 62.0 52 59.6
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 2.9e-07 58.9 104 32.7


User provided reference genes

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