Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G067700 Carya illinoinensis HOM05D009286 ORTHO05D011130 3.6e-51 204.5 97 100.0
CiPaw.01G125200 Carya illinoinensis HOM05D009286 ORTHO05D011130 4.2e-39 164.5 99 83.8
QL06p023574 Quercus lobata HOM05D009286 ORTHO05D011130 2.1e-35 152.1 96 78.1
Cfa014890 Carpinus fangiana HOM05D009286 ORTHO05D011130 1.4e-31 139.4 86 79.1
Haze_11576 Corylus avellana HOM05D009286 ORTHO05D011130 9.3e-31 136.7 86 77.9
Manes.15G051025 Manihot esculenta HOM05D009286 ORTHO05D011130 2.5e-28 128.6 94 69.1
Gohir.D02G031400 Gossypium hirsutum HOM05D009286 ORTHO05D011130 1.1e-26 123.2 93 67.7
Gorai.005G034900 Gossypium raimondii HOM05D009286 ORTHO05D011130 1.1e-26 123.2 93 67.7
Manes.03G149800 Manihot esculenta HOM05D009286 ORTHO05D011130 1.2e-25 119.8 94 64.9
Gohir.A02G024000 Gossypium hirsutum HOM05D009286 ORTHO05D011130 2.6e-25 118.6 93 65.6
Duzib151G0679 Durio zibethinus HOM05D009286 ORTHO05D011130 9.9e-25 116.7 102 63.7
Thecc.04G210000 Theobroma cacao HOM05D009286 ORTHO05D011130 1.7e-24 115.9 103 68.0
Duzib268G0949 Durio zibethinus HOM05D009286 ORTHO05D011130 1.2e-22 109.8 103 63.1
Duzib268G0451 Durio zibethinus HOM05D009286 ORTHO05D011130 1.0e-21 106.7 103 62.1
Gohir.D09G196800 Gossypium hirsutum HOM05D009286 ORTHO05D011130 6.7e-21 104.0 101 62.4
Gorai.006G220200 Gossypium raimondii HOM05D009286 ORTHO05D011130 6.7e-21 104.0 101 62.4
Sed0020601 Sechium edule HOM05D009286 ORTHO05D011130 8.7e-21 103.6 96 56.2
Actinidia39956 Actinidia chinensis HOM05D000290 ORTHO05D006586 1.5e-20 102.8 62 79.0
Gohir.A09G202700 Gossypium hirsutum HOM05D009286 ORTHO05D011130 1.9e-20 102.4 82 68.3
COL.COLO4_20307 Corchorus olitorius HOM05D009286 ORTHO05D011130 4.3e-20 101.3 111 55.0
Potri.003G177200 Populus trichocarpa HOM05D009286 ORTHO05D011130 2.8e-19 98.6 110 56.4
Sabra03G0129800 Salix brachista HOM05D009286 ORTHO05D011130 3.1e-18 95.1 88 59.1
MBI07_g22395_MAGBIO Magnolia biondii HOM05D009286 ORTHO05D011130 3.4e-17 91.7 62 71.0
Potri.001G051300 Populus trichocarpa HOM05D009286 ORTHO05D011130 5.8e-17 90.9 87 62.1
Atru.chr4.1762 Acer truncatum HOM05D009286 ORTHO05D011130 1.0e-16 90.1 67 67.2
TAR633G2369 Trochodendron aralioides HOM05D009286 ORTHO05D011130 4.2e-15 84.7 86 57.0
Cpa.g.sc59.104 Carica papaya HOM05D009286 ORTHO05D011130 5.5e-15 84.3 77 62.3
ATR0787G204 Amborella trichopoda HOM05D009286 ORTHO05D011130 1.2e-14 83.2 64 62.5
Ciclev10006054m.g Citrus clementina HOM05D009286 ORTHO05D011130 2.7e-14 82.0 104 49.0
Oeu063490.1 Olea europaea HOM05D009286 ORTHO05D011130 1.3e-11 73.2 69 60.9
Sp1g03610 Schrenkiella parvula HOM05D008913 ORTHO05D011130 3.7e-11 71.6 89 53.9
Migut.G00633 Erythranthe guttata HOM05D009286 ORTHO05D011130 8.2e-11 70.5 64 60.9
CARHR004160 Cardamine hirsuta HOM05D008913 ORTHO05D011130 9.0e-10 67.0 81 54.3
Rhsim02G0053900 Rhododendron simsii HOM05D009286 ORTHO05D011130 1.5e-09 66.2 56 58.9
CSS0021418 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006586 1.0e-08 63.5 57 57.9
AL1G14490 Arabidopsis lyrata HOM05D009286 ORTHO05D011130 2.9e-08 62.0 51 64.7
BraA10t42594Z Brassica rapa HOM05D008913 ORTHO05D011317 2.9e-08 62.0 54 61.1
A10p03200 Brassica napus HOM05D008913 ORTHO05D011130 1.1e-07 60.1 54 63.0
C05p02950 Brassica napus HOM05D008913 ORTHO05D011130 1.4e-07 59.7 64 53.1
BolC5t29076H Brassica oleracea HOM05D008913 ORTHO05D011130 1.4e-07 59.7 64 53.1
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 1.2e-06 56.6 60 48.3


User provided reference genes

Program Settings