Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 3.4e-89 331.6 170 100.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.1e-87 326.6 170 98.8
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 3.2e-87 325.1 170 97.6
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 3.2e-87 325.1 170 97.6
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 4.2e-87 324.7 170 98.2
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 97.6
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 98.2
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 98.2
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 97.1
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 98.2
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 97.6
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.7e-86 322.0 169 98.2
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 96.5
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 97.1
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 96.5
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.0e-85 320.1 169 97.0
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 96.5
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 96.5
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 96.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 96.5
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.9
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.8e-85 319.3 170 95.9
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 96.5
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.9
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.9
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 96.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 95.3
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 95.9
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 5.2e-85 317.8 170 95.3
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 8.8e-85 317.0 170 95.9
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.1e-84 316.6 170 95.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.1e-84 316.6 170 95.9
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 94.7
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.0e-84 315.8 176 94.3
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 2.6e-84 315.5 169 95.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.1
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.7
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.7
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 4.4e-84 314.7 168 95.8
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 4.4e-84 314.7 168 95.8
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 4.4e-84 314.7 168 95.8
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 94.7
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 94.7
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 94.7
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 94.7
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 93.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.7e-83 311.6 168 92.9
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 3.7e-83 311.6 167 96.4
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 93.5
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 92.9
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 92.9
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.1e-82 310.1 183 89.6
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 92.9
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 92.9
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 92.9
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.4e-82 308.9 168 94.0
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 92.9
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 4.1e-82 308.1 183 89.1
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 9.1e-82 307.0 170 94.7
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.2e-81 306.6 188 85.6
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-81 306.2 190 87.4
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 2.0e-81 305.8 167 92.8
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 5.9e-81 304.3 170 90.0
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.3e-80 303.1 169 93.5
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 2.2e-80 302.4 166 91.6
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.9e-80 302.0 170 92.4
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.1e-79 300.1 169 92.3
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 2.5e-79 298.9 157 96.2
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.4e-77 293.1 168 89.3
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 1.8e-77 292.7 168 87.5
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.3e-77 292.4 157 94.3
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.0e-77 291.6 175 89.7
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 5.2e-77 291.2 167 87.4
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 2.2e-75 285.8 162 92.0
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.4e-74 283.1 164 87.8
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.4e-74 283.1 151 96.0
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.2e-73 280.0 150 95.3
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 2.7e-73 278.9 147 97.3
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 3.5e-73 278.5 151 93.4
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.8e-72 275.0 147 95.9
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.7e-70 268.9 147 93.9
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.8e-69 266.2 139 97.8
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.0e-69 265.0 140 95.7
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 5.2e-69 264.6 140 95.7
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 2.0e-68 262.7 169 75.7
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 2.6e-68 262.3 139 95.7
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 2.2e-67 259.2 139 94.2
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 2.2e-67 259.2 170 81.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 5.4e-66 254.6 262 59.2
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.3e-64 250.0 164 81.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 2.2e-64 249.2 170 79.4
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.2e-64 249.2 170 80.6
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.2e-63 245.4 168 78.0
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.8e-61 239.6 128 96.1
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 4.0e-61 238.4 130 95.4
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.6e-57 226.5 229 62.0
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 1.0e-56 223.8 125 93.6
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.3e-56 222.6 120 96.7
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.3e-56 222.6 120 96.7
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.3e-56 222.6 233 59.2
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 1.1e-55 220.3 129 86.8
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 4.4e-52 208.4 109 98.2
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.3e-51 206.8 110 95.5
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 4.9e-51 204.9 169 60.4
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.3e-43 180.3 115 82.6
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.4e-42 176.8 176 52.8
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.0e-40 170.6 170 58.2
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 1.6e-33 146.7 76 96.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 3.0e-32 142.5 117 67.5
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 5.1e-32 141.7 75 94.7
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.5e-31 140.2 75 94.7
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.3e-24 116.3 60 95.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 8.6e-24 114.4 69 87.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 8.6e-24 114.4 73 78.1
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 2.2e-19 99.8 50 96.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.0e-13 79.0 38 92.1
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-10 70.9 39 84.6
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 3.3e-07 59.3 59 59.3


User provided reference genes

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