Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 4.0e-131 471.5 245 100.0
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 3.0e-78 295.8 240 67.9
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 1.6e-74 283.5 238 63.9
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.9e-74 281.6 238 63.4
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 5.0e-73 278.5 232 66.8
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 6.5e-73 278.1 238 62.6
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 5.5e-72 275.0 235 60.4
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.1e-71 273.1 231 61.5
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.4e-70 270.4 238 58.8
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 2.0e-69 266.5 248 62.9
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.7e-68 263.5 226 60.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 2.2e-68 263.1 233 59.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 8.2e-68 261.2 221 61.1
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 1.4e-67 260.4 226 58.8
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.4e-67 260.4 247 59.1
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 3.1e-67 259.2 239 57.7
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 9.1e-67 257.7 236 57.6
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 3.5e-66 255.8 239 57.3
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 5.9e-66 255.0 244 57.8
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 1.3e-65 253.8 248 56.9
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 3.8e-65 252.3 226 59.3
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.1e-64 250.8 242 57.4
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.7e-63 246.1 238 58.8
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.2e-61 240.7 213 57.3
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 1.7e-60 236.9 232 56.5
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 4.8e-60 235.3 215 55.8
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.4e-59 233.8 257 52.5
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 3.1e-59 232.6 229 54.1
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 9.1e-59 231.1 236 53.0
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 9.1e-59 231.1 233 54.9
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.9e-57 226.1 236 52.1
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 3.8e-57 225.7 225 52.9
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 7.2e-56 221.5 225 50.2
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 7.2e-56 221.5 217 54.4
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.1e-55 219.9 221 52.9
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 8.8e-54 214.5 225 49.8
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.6e-53 213.0 228 50.0
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 2.6e-53 213.0 226 51.8
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 3.4e-53 212.6 228 50.0
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 5.7e-53 211.8 236 48.3
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 5.7e-53 211.8 228 49.6
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 5.7e-53 211.8 228 49.6
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 1.4e-51 207.2 237 47.3
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 2.4e-51 206.5 221 48.4
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.6e-50 203.8 220 46.8
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.0e-50 203.4 222 50.0
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 2.0e-50 203.4 222 50.0
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.7e-50 203.0 189 57.7
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.0e-49 201.1 177 59.3
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.3e-49 200.7 222 50.0
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.7e-49 200.3 193 57.5
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 3.8e-49 199.1 219 48.4
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 8.6e-49 198.0 217 48.4
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 1.5e-48 197.2 143 71.3
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.8e-47 193.0 162 61.7
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 6.1e-47 191.8 227 47.6
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 1.4e-43 180.6 233 45.9
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.6e-42 177.2 164 55.5
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 3.3e-40 169.5 172 47.7
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 8.9e-38 161.4 195 42.6
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 2.0e-37 160.2 172 51.7
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 1.0e-33 147.9 160 51.9
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 6.2e-31 138.7 116 62.9
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 4.6e-26 122.5 243 32.1
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 3.0e-25 119.8 108 54.6
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 6.8e-22 108.6 102 57.8
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.0e-21 107.1 114 53.5
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.7e-20 104.0 205 31.7
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.1e-19 101.3 200 31.5
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.5e-16 90.1 162 34.6
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.1e-15 87.0 69 65.2
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.8e-15 86.7 205 29.8
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 6.2e-15 85.5 205 29.3
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.4e-14 84.3 67 70.1
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 5.8e-13 79.0 207 26.6
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.3e-12 77.8 119 36.1
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.7e-12 77.4 114 41.2
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.6e-10 70.9 140 32.9
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 3.3e-08 63.2 52 61.5


User provided reference genes

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