Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 5.4e-81 304.3 156 100.0
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 5.3e-44 181.4 155 64.5
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 2.0e-43 179.5 158 65.8
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 3.4e-43 178.7 157 65.0
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 2.9e-34 149.1 135 64.4
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 1.0e-31 140.6 156 54.5
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-30 137.1 146 50.7
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.4e-28 130.2 157 50.3
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.3e-28 128.3 157 49.7
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 6.9e-28 127.9 156 48.7
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 9.1e-28 127.5 146 50.0
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-27 126.3 156 48.7
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-27 126.3 157 49.7
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 4.5e-27 125.2 148 51.4
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 1.3e-26 123.6 152 52.6
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.3e-26 123.6 146 47.3
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 8.5e-26 120.9 153 49.7
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.6e-24 116.7 155 48.4
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 2.1e-24 116.3 147 46.9
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.0e-23 112.5 161 46.6
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 3.9e-23 112.1 161 43.5
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 5.1e-23 111.7 148 50.0
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 8.8e-23 110.9 136 48.5
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.1e-22 110.5 118 53.4
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 9.7e-22 107.5 149 45.0
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 9.7e-22 107.5 141 47.5
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 1.3e-21 107.1 154 42.2
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 2.8e-21 105.9 174 40.8
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.8e-21 105.9 155 42.6
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.8e-21 105.1 155 43.9
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 6.3e-21 104.8 149 45.0
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.3e-21 104.8 158 44.3
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 1.1e-20 104.0 150 40.7
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 1.4e-20 103.6 144 43.1
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.4e-20 102.8 142 43.7
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.1e-20 102.4 158 43.0
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.1e-20 102.1 158 43.7
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 4.1e-20 102.1 152 44.1
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 4.1e-20 102.1 156 42.3
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 5.3e-20 101.7 155 42.6
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 9.1e-20 100.9 146 44.5
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 9.1e-20 100.9 152 41.4
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 9.1e-20 100.9 160 41.9
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.2e-19 100.5 149 43.6
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.5e-19 100.1 165 41.8
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.5e-19 100.1 108 56.5
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.5e-19 100.1 161 41.0
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 2.0e-19 99.8 167 40.1
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-19 99.4 161 40.4
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 2.6e-19 99.4 166 39.2
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 3.5e-19 99.0 151 43.0
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 4.5e-19 98.6 144 41.0
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 5.9e-19 98.2 170 42.4
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 7.7e-19 97.8 120 50.8
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 7.7e-19 97.8 172 40.7
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 7.7e-19 97.8 146 41.1
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 1.0e-18 97.4 148 47.3
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 1.3e-18 97.1 159 40.9
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.3e-18 97.1 157 42.7
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 3.8e-18 95.5 148 39.9
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 5.0e-18 95.1 165 40.0
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 6.5e-18 94.7 143 47.6
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 6.5e-18 94.7 143 47.6
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 8.5e-18 94.4 166 36.7
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.1e-17 94.0 153 44.4
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.9e-17 93.2 147 45.6
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.9e-17 93.2 166 41.6
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.5e-17 92.8 171 39.8
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 2.5e-17 92.8 156 41.7
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 5.5e-17 91.7 146 45.9
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.2e-16 90.5 171 37.4
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 1.6e-16 90.1 164 39.0
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.6e-16 90.1 143 41.3
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.6e-16 90.1 149 40.9
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.6e-16 90.1 172 37.2
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 2.1e-16 89.7 143 44.1
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.6e-16 89.0 161 41.6
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 4.7e-16 88.6 142 43.0
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 8.0e-16 87.8 142 41.5
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 8.0e-16 87.8 146 39.7
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.0e-15 87.4 152 37.5
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.0e-15 87.4 163 39.9
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 1.0e-15 87.4 148 39.9
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 1.4e-15 87.0 163 39.9
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.4e-15 87.0 163 39.9
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 2.3e-15 86.3 144 42.4
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 2.3e-15 86.3 144 42.4
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 2.3e-15 86.3 123 43.9
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 3.9e-15 85.5 152 41.4
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 5.2e-15 85.1 163 36.2
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 5.2e-15 85.1 143 40.6
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 6.7e-15 84.7 150 42.0
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 1.1e-14 84.0 147 42.9
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 1.1e-14 84.0 140 42.1
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.0e-14 83.2 133 40.6
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 2.0e-14 83.2 147 40.1
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 2.6e-14 82.8 147 41.5
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 4.4e-14 82.0 142 43.0
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 5.7e-14 81.6 110 47.3
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 5.7e-14 81.6 110 47.3
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 5.7e-14 81.6 146 38.4
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 7.4e-14 81.3 166 36.7
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 7.4e-14 81.3 139 38.8
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 1.3e-13 80.5 101 45.5
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.7e-13 80.1 142 38.0
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.7e-13 80.1 142 38.0
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 2.2e-13 79.7 115 46.1
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 3.7e-13 79.0 148 35.8
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.7e-13 79.0 152 40.1
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 6.3e-13 78.2 167 35.9
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.2e-13 77.8 102 49.0
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 1.1e-12 77.4 142 38.7
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 1.1e-12 77.4 140 38.6
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 1.1e-12 77.4 142 38.7
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.4e-12 77.0 141 37.6
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.4e-12 77.0 141 37.6
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.4e-12 77.0 144 41.0
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 1.4e-12 77.0 99 47.5
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 1.8e-12 76.6 148 37.8
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 2.4e-12 76.3 144 38.9
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 5.3e-12 75.1 147 37.4
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 9.1e-12 74.3 113 42.5
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-11 73.9 100 44.0
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 1.2e-11 73.9 142 38.7
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 2.6e-11 72.8 100 46.0
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 3.5e-11 72.4 111 41.4
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 5.9e-11 71.6 117 44.4
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 5.9e-11 71.6 148 38.5
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 7.7e-11 71.2 139 38.1
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.2e-10 69.7 92 46.7
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 5.0e-10 68.6 138 37.7
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 5.0e-10 68.6 138 37.7
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 6.5e-10 68.2 148 36.5
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 6.5e-10 68.2 141 34.0
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.9e-09 66.6 48 64.6
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 3.2e-09 65.9 143 35.0
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 4.2e-09 65.5 87 48.3
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 7.2e-09 64.7 133 38.3
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.2e-08 63.9 133 37.6
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 2.1e-08 63.2 159 35.2
Medtr1g084160 Medicago truncatula HOM05D001624 ORTHO05D001530 2.3e-07 59.7 146 31.5
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 3.0e-07 59.3 175 30.9
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 5.2e-07 58.5 118 39.0
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.2e-06 57.4 182 31.3
SGA_v2.0_scaffold5G02896 Striga asiatica HOM05D001624 ORTHO05D001530 1.2e-06 57.4 149 34.2
SEGI_22868 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 2.6e-06 56.2 174 30.5
SGA_v2.0_scaffold37G14601 Striga asiatica HOM05D001624 ORTHO05D001530 3.3e-06 55.8 151 31.1
MSTRG.5143 Avicennia marina HOM05D001624 ORTHO05D001530 4.4e-06 55.5 148 31.8
MBI07_g21783_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 5.7e-06 55.1 163 31.3
HPP92_001231 Vanilla planifolia HOM05D001624 ORTHO05D001530 9.7e-06 54.3 121 31.4


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