Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 3.3e-153 545.0 283 100.0
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 6.3e-104 381.3 279 74.6
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 6.3e-88 328.2 299 62.2
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.1e-87 327.4 289 63.3
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 7.0e-87 324.7 278 65.1
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.0e-85 320.9 282 63.8
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 2.9e-85 319.3 280 63.2
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.6e-83 313.5 268 66.4
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 2.8e-83 312.8 275 64.4
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.8e-82 308.1 275 64.0
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 1.2e-81 307.4 286 59.8
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.5e-81 307.0 278 60.4
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 2.0e-81 306.6 283 61.1
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 2.6e-81 306.2 207 72.9
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.5e-81 304.7 274 62.8
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 9.8e-81 304.3 278 61.2
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.7e-80 303.5 293 59.0
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.2e-80 303.1 289 61.2
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 1.2e-78 297.4 287 60.3
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 1.2e-78 297.4 286 58.4
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.6e-78 297.0 271 62.4
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 2.0e-78 296.6 228 66.2
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.0e-78 296.6 269 59.1
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 2.0e-78 296.6 281 58.7
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 2.7e-78 296.2 297 56.6
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 7.8e-78 294.7 282 59.2
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 7.8e-78 294.7 272 59.2
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.0e-77 294.3 282 58.9
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.0e-77 294.3 254 66.1
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.0e-77 294.3 266 59.8
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 1.3e-77 293.9 263 60.5
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 1.7e-77 293.5 211 70.6
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.7e-77 293.5 281 58.4
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 2.3e-77 293.1 301 55.8
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 8.6e-77 291.2 213 69.5
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 8.6e-77 291.2 258 60.1
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.1e-76 290.8 279 58.8
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.5e-76 290.4 274 58.4
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 1.9e-76 290.0 210 70.0
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 2.5e-76 289.7 224 65.6
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 4.3e-76 288.9 277 57.8
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 7.3e-76 288.1 215 67.9
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.2e-75 287.3 271 57.9
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.2e-75 287.3 251 62.5
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 2.1e-75 286.6 282 57.8
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 2.1e-75 286.6 282 57.8
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 2.1e-75 286.6 220 65.5
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 3.6e-75 285.8 259 61.4
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 3.6e-75 285.8 248 61.7
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 6.2e-75 285.0 280 57.1
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 8.0e-75 284.6 279 57.7
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 1.8e-74 283.5 236 63.1
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.3e-74 283.1 279 58.8
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.3e-74 283.1 274 57.3
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 8.9e-74 281.2 254 58.7
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.2e-73 280.8 281 54.1
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 3.4e-73 279.3 229 63.3
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 3.4e-73 279.3 266 58.6
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 9.8e-73 277.7 280 56.1
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 1.3e-72 277.3 283 56.9
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.3e-72 277.3 266 59.4
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 1.7e-72 276.9 257 57.2
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.2e-72 276.6 279 57.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.9e-72 276.2 215 65.1
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 8.3e-72 274.6 279 57.0
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 8.3e-72 274.6 275 57.1
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 1.9e-71 273.5 215 64.7
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 4.6e-70 268.9 256 59.4
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 7.8e-70 268.1 195 70.3
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.0e-69 267.7 240 58.8
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 2.3e-69 266.5 266 54.1
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.9e-68 263.5 256 59.4
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 2.5e-68 263.1 174 74.1
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.2e-67 260.8 272 55.9
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.6e-67 259.2 269 55.0
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 3.6e-67 259.2 272 56.6
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 3.6e-67 259.2 199 66.3
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 4.7e-67 258.8 257 57.6
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 5.2e-66 255.4 214 59.8
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.5e-65 253.8 195 69.7
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 2.0e-65 253.4 188 67.6
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 2.6e-65 253.1 271 50.9
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 5.8e-65 251.9 274 56.9
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 5.8e-65 251.9 264 55.3
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 1.3e-64 250.8 263 55.5
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 4.9e-64 248.8 184 65.2
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.9e-63 246.9 233 60.9
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.2e-62 244.2 253 55.3
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 6.2e-59 231.9 198 57.6
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 8.9e-58 228.0 167 68.3
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 7.6e-57 224.9 167 68.9
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 4.9e-56 222.2 236 55.9
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 1.4e-55 220.7 265 50.9
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.0e-53 213.0 268 48.9
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.5e-52 210.7 238 53.8
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 2.5e-52 209.9 290 45.5
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 1.2e-51 207.6 193 65.8
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 7.6e-49 198.4 171 57.3
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 2.2e-48 196.8 247 44.1
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 2.9e-48 196.4 196 53.1
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 1.4e-47 194.1 196 63.3
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.5e-46 189.5 161 61.5
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.9e-44 183.7 303 44.9
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.3e-44 181.8 317 42.9
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 8.1e-43 178.3 136 68.4
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.1e-42 176.4 175 62.9
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 1.2e-38 164.5 264 39.8
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 2.1e-38 163.7 93 87.1
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 4.6e-38 162.5 93 87.1
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 1.0e-37 161.4 94 83.0
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 3.0e-37 159.8 266 38.0
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 1.5e-36 157.5 195 43.6
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.7e-35 152.9 133 59.4
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 2.4e-34 150.2 213 42.7
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 9.0e-34 148.3 162 46.9
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.0e-29 134.8 194 45.9
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.1e-28 131.3 87 73.6
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.1e-23 114.8 260 33.5
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 7.1e-23 112.1 210 43.8
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 7.1e-23 112.1 270 33.0
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 3.9e-21 106.3 171 44.4
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.4e-17 93.2 60 73.3
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 6.5e-08 62.4 51 56.9
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.1e-07 61.6 202 32.2
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 1.1e-07 61.6 50 58.0


User provided reference genes

Program Settings