Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 4.5e-163 577.8 275 100.0
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 7.2e-129 464.2 273 79.5
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 4.7e-128 461.5 275 79.3
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 1.1e-126 456.8 275 77.1
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 2.6e-126 455.7 275 76.4
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 2.6e-126 455.7 275 76.4
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 7.4e-126 454.1 268 78.4
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.3e-125 453.4 275 75.6
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 3.7e-125 451.8 273 76.2
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 1.1e-124 450.3 266 77.8
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 9.1e-124 447.2 273 77.7
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 9.1e-124 447.2 268 78.4
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.6e-123 446.4 274 78.1
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 2.2e-122 442.6 269 78.1
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 2.2e-122 442.6 275 75.6
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 2.7e-120 435.6 275 74.9
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 8.0e-120 434.1 245 80.4
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 5.2e-119 431.4 273 74.7
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.2e-119 431.4 270 73.7
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.2e-119 431.4 270 73.7
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 6.8e-119 431.0 259 77.6
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 8.8e-119 430.6 267 74.5
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.5e-118 429.9 260 74.6
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.3e-117 426.8 263 74.9
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 3.7e-117 425.2 292 72.9
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 6.3e-117 424.5 273 72.9
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 8.3e-117 424.1 271 73.1
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.1e-116 423.7 272 73.2
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.8e-116 422.9 267 73.8
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 1.8e-116 422.9 268 73.9
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 2.4e-116 422.5 268 72.0
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 4.1e-116 421.8 270 73.0
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 7.0e-116 421.0 263 74.5
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.6e-115 419.9 275 71.3
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 2.0e-115 419.5 275 71.3
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 2.7e-115 419.1 273 73.3
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.3e-114 416.8 273 71.4
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.7e-114 416.4 266 72.2
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 2.2e-114 416.0 264 70.5
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.9e-114 415.6 263 73.0
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 1.1e-113 413.7 263 71.5
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.1e-113 413.7 265 74.3
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.5e-113 413.3 273 71.8
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 2.5e-113 412.5 267 72.3
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 3.2e-113 412.1 251 75.3
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 7.2e-113 411.0 273 71.1
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 7.2e-113 411.0 259 72.2
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 9.4e-113 410.6 264 73.1
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.2e-112 410.2 262 73.3
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 3.6e-112 408.7 266 70.3
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 3.6e-112 408.7 281 69.0
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 4.7e-112 408.3 273 70.0
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 4.7e-112 408.3 263 70.0
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 1.0e-111 407.1 261 72.0
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.8e-111 406.4 274 69.3
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 3.0e-111 405.6 248 77.0
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 3.0e-111 405.6 263 69.6
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 6.8e-111 404.4 261 73.2
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.5e-110 403.3 261 69.7
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 2.0e-110 402.9 271 68.6
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 3.4e-110 402.1 275 69.5
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 3.4e-110 402.1 261 69.3
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 4.4e-110 401.7 263 71.9
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 1.1e-108 397.1 263 68.8
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.4e-108 396.0 270 70.4
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.3e-106 390.2 250 71.6
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.7e-106 389.8 260 69.2
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 3.8e-106 388.7 284 64.8
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 3.3e-105 385.6 271 66.8
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 7.2e-105 384.4 249 71.1
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 3.6e-104 382.1 239 75.3
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 4.7e-104 381.7 278 66.2
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.4e-102 375.2 275 66.5
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.0e-98 364.0 254 64.6
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 2.9e-98 362.5 222 73.9
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.5e-97 360.1 256 68.8
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 7.3e-97 357.8 234 72.2
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 3.7e-93 345.5 243 69.5
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 3.7e-93 345.5 237 69.6
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 6.4e-93 344.7 243 69.5
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 1.9e-89 333.2 232 65.9
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.9e-89 333.2 236 62.7
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 7.5e-86 321.2 204 74.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 7.1e-84 314.7 193 75.1
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 6.0e-83 311.6 232 62.9
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 7.3e-81 304.7 175 79.4
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.3e-79 299.7 183 74.9
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 2.0e-78 296.6 265 57.0
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 2.6e-78 296.2 163 84.7
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 3.2e-76 289.3 237 55.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 5.4e-76 288.5 237 51.5
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 3.6e-72 275.8 236 50.8
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 2.4e-68 263.1 186 67.2
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.2e-62 244.2 138 76.8
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 6.0e-59 231.9 150 74.7
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 6.9e-55 218.4 159 67.9
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 2.9e-53 213.0 111 88.3
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 6.4e-53 211.8 161 59.6
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 8.4e-53 211.5 144 70.1
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 7.1e-52 208.4 131 75.6
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 7.1e-52 208.4 131 75.6
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.8e-50 203.8 138 71.7
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.3e-49 199.1 129 69.0
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 9.6e-41 171.4 150 58.0
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.6e-40 170.6 105 73.3
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.5e-35 152.9 244 34.8
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.8e-31 140.6 267 39.3
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 9.4e-28 128.3 166 46.4
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 2.0e-25 120.6 111 52.3
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 1.8e-23 114.0 62 79.0
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.3e-21 107.8 62 72.6
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.8e-18 97.4 68 64.7
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 6.7e-18 95.5 49 85.7
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.7e-17 92.4 44 90.9
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.7e-17 92.4 44 90.9
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 4.1e-15 86.3 156 30.8
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.7e-13 80.9 43 90.7
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 4.2e-12 76.3 55 58.2
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 6.7e-10 68.9 59 54.2
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 1.1e-09 68.2 53 58.5
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.0e-09 67.4 38 81.6
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.0e-09 67.4 38 81.6
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 7.5e-09 65.5 37 73.0
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.8e-08 63.5 74 47.3
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 8.2e-08 62.0 77 46.8
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 1.4e-07 61.2 36 69.4
HanXRQChr12g0365531 Helianthus annuus HOM05D006283 ORTHO05D007727 2.0e-06 57.4 86 40.7


User provided reference genes

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