Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 4.5e-172 607.8 305 100.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 7.0e-141 504.2 305 84.3
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 1.2e-132 476.9 305 77.7
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.3e-131 473.4 305 77.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 8.0e-121 437.6 306 71.9
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.0e-115 420.6 299 70.2
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 3.3e-114 415.6 307 68.4
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 4.7e-113 411.8 295 70.8
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 6.1e-113 411.4 305 68.2
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.4e-112 410.2 305 68.5
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 5.2e-112 408.3 305 66.2
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.5e-111 406.8 306 67.6
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 2.0e-111 406.4 305 66.6
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 2.6e-111 406.0 301 68.4
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.7e-111 404.8 305 66.9
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.9e-110 402.5 301 69.4
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 2.9e-110 402.5 306 68.0
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.4e-109 400.2 306 67.6
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 9.2e-109 397.5 301 67.8
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 3.5e-108 395.6 298 66.8
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.5e-108 395.6 298 66.8
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 4.6e-108 395.2 306 65.4
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 5.9e-108 394.8 306 66.7
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.1e-106 390.6 306 64.7
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.1e-106 390.6 301 66.4
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 3.6e-105 385.6 306 64.7
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.6e-105 385.6 296 67.9
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 6.2e-105 384.8 300 66.7
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.0e-104 384.0 330 60.6
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.3e-102 377.1 363 55.1
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.9e-101 373.2 306 63.4
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 4.1e-101 372.1 306 62.7
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 7.0e-101 371.3 306 62.4
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 1.2e-100 370.5 302 63.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 2.0e-100 369.8 306 62.4
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 4.6e-100 368.6 305 61.6
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 7.8e-100 367.9 303 62.7
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 5.0e-99 365.2 309 59.9
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 2.1e-97 359.8 303 62.7
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.1e-96 357.5 306 60.8
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.4e-96 357.1 307 60.3
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 3.1e-96 355.9 307 59.0
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 3.1e-96 355.9 306 58.2
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.0e-95 353.2 306 60.1
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.7e-94 350.1 314 58.3
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.4e-93 347.1 306 59.8
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 3.2e-93 345.9 306 60.5
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 7.1e-93 344.7 306 59.5
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 7.1e-93 344.7 308 58.1
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.2e-92 344.0 307 58.3
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.6e-92 343.6 307 57.7
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.1e-92 343.2 306 58.8
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 3.5e-92 342.4 310 57.7
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 3.5e-92 342.4 304 58.9
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 6.0e-92 341.7 306 57.5
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 7.8e-92 341.3 306 58.2
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 7.8e-92 341.3 306 57.8
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.3e-91 340.5 301 59.1
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.7e-91 340.1 306 58.5
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.7e-91 340.1 306 57.2
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.1e-90 337.4 306 58.2
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.5e-90 337.0 310 58.7
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.9e-90 336.7 306 58.8
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 1.9e-90 336.7 306 57.8
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.5e-90 336.3 308 57.1
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 7.3e-90 334.7 306 58.8
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 2.8e-89 332.8 306 57.5
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 3.6e-89 332.4 305 59.0
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 3.6e-89 332.4 302 57.0
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 4.7e-89 332.0 306 58.8
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 4.7e-89 332.0 306 58.8
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 6.2e-89 331.6 308 55.5
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 2.3e-88 329.7 306 56.2
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 4.0e-88 328.9 306 57.8
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 4.0e-88 328.9 277 63.2
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.2e-87 327.4 294 60.2
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.0e-87 326.6 306 54.6
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 4.4e-87 325.5 306 56.5
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 9.9e-87 324.3 299 56.2
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.3e-86 323.9 306 56.9
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 4.9e-86 322.0 306 54.9
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 6.4e-86 321.6 306 54.6
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 5.4e-85 318.5 307 52.4
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 9.2e-85 317.8 305 56.7
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 1.2e-84 317.4 307 56.7
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 6.0e-84 315.1 305 54.8
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.1e-83 312.0 303 55.8
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.5e-82 310.5 306 53.3
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 9.6e-82 307.8 306 54.2
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 9.6e-82 307.8 309 53.4
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 2.8e-81 306.2 317 51.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 6.2e-81 305.1 317 51.1
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 2.4e-77 293.1 305 54.1
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 8.7e-75 284.6 210 67.6
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 5.6e-74 282.0 264 56.8
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 1.7e-70 270.4 170 82.4
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 7.9e-68 261.5 269 50.6
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.8e-67 260.4 312 48.4
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 3.0e-67 259.6 238 57.6
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 6.2e-65 251.9 200 64.5
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 2.4e-64 250.0 305 49.8
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.9e-62 243.0 201 61.2
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.4e-61 240.7 272 50.7
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 2.5e-45 186.8 250 42.8
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 6.7e-43 178.7 188 53.7
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.5e-37 160.2 105 72.4
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 4.8e-33 146.0 308 31.5
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.0e-30 138.3 217 41.0
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 3.6e-28 129.8 121 54.5
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-26 124.8 103 62.1
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 3.7e-25 119.8 120 55.0
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 8.2e-25 118.6 118 50.0
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-24 117.1 131 48.9
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.6e-23 113.6 131 47.3
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 5.9e-23 112.5 131 47.3
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 6.5e-22 109.0 133 46.6
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-21 107.5 120 49.2
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 5.5e-21 105.9 68 73.5
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 1.2e-20 104.8 67 74.6
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 3.6e-20 103.2 120 47.5
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 2.6e-18 97.1 270 27.4
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 1.3e-17 94.7 241 34.0
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 3.1e-16 90.1 122 44.3
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 4.7e-12 76.3 168 33.9
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.8e-11 74.3 64 53.1
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 2.3e-06 57.4 82 40.2


User provided reference genes

Program Settings