Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G052800 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.6e-147 524.2 261 100.0
CiPaw.05G159600 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.7e-69 265.4 241 58.5
CiPaw.06G117600 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.3e-58 230.7 175 62.9
CiPaw.10G034700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.5e-54 216.5 161 62.7
CiPaw.13G114900 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.5e-54 215.3 161 62.7
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.4e-44 184.1 252 42.1
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.2e-44 182.2 264 40.5
CiPaw.14G058600 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.8e-44 181.8 173 52.0
CiPaw.15G026500 Carya illinoinensis HOM05D003171 ORTHO05D000921 8.3e-42 174.9 251 43.0
CiPaw.15G025900 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.1e-41 174.5 251 43.0
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.2e-40 171.0 252 39.7
CiPaw.05G225500 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.9e-38 163.7 245 39.6
CiPaw.10G092200 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.6e-37 160.6 249 40.6
CiPaw.10G123700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.1e-37 160.2 252 39.7
CiPaw.06G138500 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.7e-37 159.1 268 39.6
CiPaw.09G111600 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.0e-36 156.0 176 46.6
CiPaw.12G018500 Carya illinoinensis HOM05D003171 ORTHO05D000921 7.0e-33 145.2 243 39.5
CiPaw.03G149700 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.5e-30 137.5 252 34.1
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 2.4e-17 93.6 227 30.8
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 3.2e-17 93.2 166 31.9
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 9.2e-17 91.7 220 29.1
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-16 91.3 208 28.8
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 1.6e-16 90.9 208 28.8
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.6e-16 90.9 208 28.8
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 1.6e-16 90.9 208 28.8
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 1.6e-16 90.9 208 28.8
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 2.7e-16 90.1 176 31.2
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.6e-16 89.4 161 29.8
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.0e-16 89.0 159 28.9
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 6.0e-16 89.0 161 31.7
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 2.3e-15 87.0 197 27.9
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 3.9e-15 86.3 127 40.2
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 6.6e-15 85.5 125 33.6
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 6.6e-15 85.5 257 27.2
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.5e-14 84.3 257 26.8
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 4.3e-14 82.8 245 28.6
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 1.2e-13 81.3 156 28.8
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-13 81.3 178 28.7
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.6e-13 80.9 198 26.8
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 1.6e-13 80.9 178 28.1
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.8e-13 80.1 141 29.1
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 3.6e-13 79.7 149 30.2
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 3.6e-13 79.7 149 30.2
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 4.7e-13 79.3 178 28.7
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 6.2e-13 79.0 170 26.5
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 8.1e-13 78.6 136 33.8
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 8.1e-13 78.6 208 29.8
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.1e-12 78.2 169 27.2
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 1.4e-12 77.8 162 31.5
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 1.8e-12 77.4 207 28.5
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 1.8e-12 77.4 130 33.1
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 2.3e-12 77.0 223 27.4
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 3.1e-12 76.6 142 30.3
Lj6g0011077 Lotus japonicus HOM05D003171 ORTHO05D000921 3.1e-12 76.6 208 27.9
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 4.0e-12 76.3 236 23.7
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 6.8e-12 75.5 195 26.7
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 8.9e-12 75.1 100 40.0
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 8.9e-12 75.1 259 23.6
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 1.2e-11 74.7 147 28.6
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.2e-11 74.7 155 27.1
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-11 74.7 252 24.6
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 1.5e-11 74.3 144 29.9
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 1.5e-11 74.3 144 30.6
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-11 74.3 154 26.0
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-11 74.3 154 26.0
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 2.0e-11 73.9 194 28.9
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 2.0e-11 73.9 97 40.2
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 2.6e-11 73.6 154 26.0
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 2.6e-11 73.6 156 27.6
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 2.6e-11 73.6 154 26.0
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 2.6e-11 73.6 154 26.0
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 5.8e-11 72.4 251 25.1
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.6e-11 72.0 156 29.5
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 7.6e-11 72.0 92 35.9
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 7.6e-11 72.0 92 37.0
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 9.9e-11 71.6 149 34.2
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 9.9e-11 71.6 192 26.6
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 9.9e-11 71.6 196 33.7
PGR044G2193 Punica granatum HOM05D003171 ORTHO05D000921 9.9e-11 71.6 105 32.4
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 9.9e-11 71.6 167 26.9
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 9.9e-11 71.6 167 26.9
Atru.chr6.630 Acer truncatum HOM05D003171 ORTHO05D000921 1.3e-10 71.2 174 25.3
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 1.3e-10 71.2 161 26.7
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.2e-10 70.5 156 28.8
Lj5g0008420 Lotus japonicus HOM05D003171 ORTHO05D000921 3.8e-10 69.7 139 30.9
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 3.8e-10 69.7 160 26.9
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 4.9e-10 69.3 180 25.6
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 6.4e-10 68.9 158 27.8
Potri.006G265900 Populus trichocarpa HOM05D000665 ORTHO05D000140 6.4e-10 68.9 155 28.4
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 6.4e-10 68.9 202 22.8
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 6.4e-10 68.9 96 33.3
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 6.4e-10 68.9 259 23.6
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 8.4e-10 68.6 202 23.3
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.1e-09 68.2 161 29.2
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.1e-09 68.2 161 29.2
Nn8g39982 Nelumbo nucifera HOM05D013718 ORTHO05D000285 1.1e-09 68.2 80 42.5
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-09 68.2 105 30.5
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 1.4e-09 67.8 142 31.7
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.4e-09 67.8 197 29.4
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 1.4e-09 67.8 116 35.3
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.9e-09 67.4 155 27.7
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.9e-09 67.4 134 26.1
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 1.9e-09 67.4 261 26.4
PGR045G0004 Punica granatum HOM05D003171 ORTHO05D000921 2.4e-09 67.0 105 29.5
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 2.4e-09 67.0 153 27.5
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 3.2e-09 66.6 237 23.2
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 4.1e-09 66.2 124 33.1
Dinv06146 Davidia involucrata HOM05D003171 ORTHO05D000921 5.4e-09 65.9 84 40.5
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 7.1e-09 65.5 236 22.5
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-08 64.7 197 25.9
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 1.6e-08 64.3 193 28.0
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 1.6e-08 64.3 193 28.0
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 1.6e-08 64.3 193 28.0
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 1.6e-08 64.3 93 37.6
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.1e-08 63.9 119 31.1
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 2.1e-08 63.9 97 39.2
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 2.1e-08 63.9 203 28.1
Psat7g176640 Pisum sativum HOM05D000665 ORTHO05D000921 2.1e-08 63.9 107 28.0
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-08 63.9 190 27.9
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.5e-08 63.2 173 27.2
Manes.16G131100 Manihot esculenta HOM05D000665 ORTHO05D000140 3.5e-08 63.2 155 27.1
Psat7g015480 Pisum sativum HOM05D000665 ORTHO05D000921 3.5e-08 63.2 107 28.0
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 3.5e-08 63.2 158 27.8
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 3.5e-08 63.2 197 25.4
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 3.5e-08 63.2 168 26.2
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 3.5e-08 63.2 122 31.1
Migut.A00363 Erythranthe guttata HOM05D000665 ORTHO05D000140 4.6e-08 62.8 147 25.2
PGR102G0976 Punica granatum HOM05D003171 ORTHO05D000921 4.6e-08 62.8 95 35.8
PGR142G2608 Punica granatum HOM05D003171 ORTHO05D000921 4.6e-08 62.8 95 35.8
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 6.0e-08 62.4 175 26.9
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 6.0e-08 62.4 228 25.0
Ciclev10033416m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.8e-08 62.0 167 25.7
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-08 62.0 195 25.6
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-08 62.0 195 25.6
PGR142G0886 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-08 62.0 241 24.9
PGR142G3438 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-08 62.0 206 23.3
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 1.0e-07 61.6 74 41.9
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.0e-07 61.6 179 27.9
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-07 61.6 93 35.5
PGR102G1281 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-07 61.6 93 35.5
PGR119G2496 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-07 61.6 240 23.8
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 1.0e-07 61.6 205 26.8
Dinv09638 Davidia involucrata HOM05D008473 ORTHO05D000921 1.3e-07 61.2 105 30.5
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.3e-07 61.2 110 34.5
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 61.2 197 25.4
PGR031G0230 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 61.2 197 24.9
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 61.2 195 25.6
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-07 60.8 136 27.2
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 2.3e-07 60.5 196 25.5
Atru.chr2.1871 Acer truncatum HOM05D001008 ORTHO05D003293 3.0e-07 60.1 123 29.3
Nn3g21369 Nelumbo nucifera HOM05D013718 ORTHO05D000921 3.0e-07 60.1 81 39.5
Oeu021910.1 Olea europaea HOM05D000665 ORTHO05D000140 3.9e-07 59.7 186 24.7
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 5.1e-07 59.3 131 23.7
Ciclev10033776m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.1e-07 59.3 100 31.0
Potri.013G025200 Populus trichocarpa HOM05D000665 ORTHO05D000140 5.1e-07 59.3 141 24.1
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 6.6e-07 58.9 242 21.9
Eucgr.E03604 Eucalyptus grandis HOM05D000665 ORTHO05D000285 8.6e-07 58.5 130 26.2
Eucgr.C01733 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.1e-06 58.2 130 26.9
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 1.5e-06 57.8 184 28.8
Thhalv10000052m.g Eutrema salsugineum HOM05D000665 ORTHO05D000140 1.5e-06 57.8 160 24.4
Eucgr.F03745 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.9e-06 57.4 127 26.0
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 1.9e-06 57.4 249 24.5
PGR119G1897 Punica granatum HOM05D003171 ORTHO05D000921 1.9e-06 57.4 206 21.8
Sabra13G0026400 Salix brachista HOM05D000665 ORTHO05D000140 1.9e-06 57.4 141 22.7
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 1.9e-06 57.4 156 24.4
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.5e-06 57.0 208 26.4
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.5e-06 57.0 93 34.4
vmacro05149 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 2.5e-06 57.0 138 26.8
Rhsim04G0014700 Rhododendron simsii HOM05D000665 ORTHO05D003147 3.3e-06 56.6 149 26.2
THA.LOC104819951 Tarenaya hassleriana HOM05D000665 ORTHO05D000140 3.3e-06 56.6 160 24.4
CSS0001337 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 4.3e-06 56.2 145 27.6
Psat5g276600 Pisum sativum HOM05D003171 ORTHO05D000921 4.3e-06 56.2 62 38.7
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 4.3e-06 56.2 125 28.8
PGR142G0920 Punica granatum HOM05D003171 ORTHO05D000921 4.3e-06 56.2 125 28.0
Haze_03773 Corylus avellana HOM05D000665 ORTHO05D003147 5.6e-06 55.8 153 24.2
Dinv33623 Davidia involucrata HOM05D000665 ORTHO05D003147 5.6e-06 55.8 141 26.2
CANSAT21G0095 Cannabis sativa HOM05D007209 ORTHO05D000921 7.3e-06 55.5 106 28.3
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 7.3e-06 55.5 253 24.5
Rhsim09G0057100 Rhododendron simsii HOM05D021294 ORTHO05D000921 7.3e-06 55.5 155 29.0
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 9.6e-06 55.1 133 22.6
Medtr3g065345 Medicago truncatula HOM05D008338 ORTHO05D000921 9.6e-06 55.1 72 36.1


User provided reference genes

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