Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 2.6e-110 402.1 209 100.0
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 5.9e-83 311.2 166 88.6
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 4.4e-78 295.0 168 82.7
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 8.3e-77 290.8 167 81.4
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 1.1e-76 290.4 168 81.0
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 1.8e-76 289.7 167 82.0
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 3.1e-76 288.9 162 84.6
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 4.1e-76 288.5 167 81.4
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 5.4e-76 288.1 166 81.9
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 7.0e-76 287.7 167 82.6
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 7.0e-76 287.7 166 80.1
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 9.2e-76 287.3 165 81.8
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 9.2e-76 287.3 167 79.6
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 1.2e-75 287.0 164 82.3
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.0e-75 286.2 167 80.8
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 2.0e-75 286.2 166 79.5
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 2.7e-75 285.8 168 78.6
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 2.7e-75 285.8 166 79.5
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 7.8e-75 284.3 167 77.8
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 1.0e-74 283.9 167 80.2
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.0e-74 283.9 167 80.2
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 1.3e-74 283.5 168 79.2
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 6.6e-74 281.2 164 80.5
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 1.1e-73 280.4 188 73.4
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.5e-73 280.0 164 79.9
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.5e-73 280.0 165 79.4
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 1.5e-73 280.0 167 78.4
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 1.5e-73 280.0 168 79.8
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 1.9e-73 279.6 164 79.3
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 3.3e-73 278.9 167 78.4
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 5.6e-73 278.1 169 79.3
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 7.3e-73 277.7 167 79.0
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 1.2e-72 276.9 162 79.6
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.2e-72 276.9 169 78.1
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 2.1e-72 276.2 167 77.2
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 3.6e-72 275.4 164 81.1
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 4.7e-72 275.0 164 81.1
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 6.1e-72 274.6 168 76.8
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 8.0e-72 274.2 164 80.5
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.0e-71 273.9 195 69.7
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 1.4e-71 273.5 170 77.1
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 1.4e-71 273.5 170 77.1
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.3e-71 272.7 164 79.9
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 4.0e-71 271.9 167 77.2
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 4.0e-71 271.9 168 75.0
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 5.2e-71 271.6 169 78.1
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 5.2e-71 271.6 173 75.1
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 5.2e-71 271.6 158 81.0
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 6.8e-71 271.2 163 79.8
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 8.9e-71 270.8 168 75.6
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 1.2e-70 270.4 172 77.3
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 1.2e-70 270.4 155 81.9
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.5e-70 270.0 172 75.0
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 2.6e-70 269.2 162 79.6
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 3.4e-70 268.9 171 77.2
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 5.8e-70 268.1 167 77.2
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 5.8e-70 268.1 167 76.0
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 5.8e-70 268.1 162 79.6
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 9.8e-70 267.3 163 78.5
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 9.8e-70 267.3 162 78.4
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 9.8e-70 267.3 167 77.2
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 2.2e-69 266.2 162 78.4
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 2.2e-69 266.2 162 78.4
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 2.2e-69 266.2 164 77.4
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 2.9e-69 265.8 164 77.4
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 3.7e-69 265.4 163 78.5
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 3.7e-69 265.4 173 71.7
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 1.9e-68 263.1 162 75.3
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 4.1e-68 261.9 170 74.7
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 1.2e-67 260.4 193 67.4
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 1.6e-67 260.0 155 77.4
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 2.0e-67 259.6 167 73.7
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 2.0e-67 259.6 172 74.4
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 4.6e-67 258.5 155 78.1
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 1.3e-66 256.9 164 73.2
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 1.7e-66 256.5 164 72.6
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 2.3e-66 256.1 162 74.1
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 3.0e-66 255.8 162 74.1
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 8.6e-66 254.2 226 58.4
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 1.9e-65 253.1 169 71.6
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 2.5e-65 252.7 163 73.0
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 1.6e-64 250.0 168 70.2
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 8.9e-63 244.2 196 64.3
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 3.4e-62 242.3 155 74.8
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 3.2e-60 235.7 167 68.3
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 7.8e-59 231.1 169 66.3
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.5e-54 216.9 123 82.9
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 9.9e-54 214.2 163 64.4
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 4.9e-53 211.8 165 58.8
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 6.4e-53 211.5 148 68.2
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 1.9e-52 209.9 168 57.7
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 6.0e-51 204.9 122 77.0
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 4.3e-49 198.7 167 57.5
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.2e-48 197.2 122 77.0
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 2.1e-48 196.4 127 74.0
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 9.2e-44 181.0 200 53.5
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 4.3e-41 172.2 149 54.4
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 8.4e-37 157.9 176 47.2
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 2.4e-36 156.4 163 44.8
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 4.0e-31 139.0 82 78.0
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 1.1e-20 104.4 60 80.0
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.6e-19 100.5 141 46.1
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 7.9e-19 98.2 60 73.3
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 3.9e-18 95.9 57 80.7
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 6.7e-18 95.1 188 31.9
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 3.2e-12 76.3 111 34.2
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 3.5e-11 72.8 131 33.6
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 2.6e-06 56.6 40 62.5


User provided reference genes

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