Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G047200 Carya illinoinensis HOM05D001576 ORTHO05D043824 3.1e-128 461.8 235 100.0
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 5.2e-35 152.1 133 63.2
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-15 85.1 117 38.5
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 5.0e-14 82.4 129 38.8
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.3e-13 79.7 140 35.0
CiPaw.11G164500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-13 79.3 140 35.7
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-13 79.0 140 35.7
CiPaw.12G051300 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-13 78.2 140 36.4
TWI18G0820 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.2e-12 77.8 117 36.8
CiPaw.09G130900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-12 77.0 89 40.4
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.1e-12 77.0 113 36.3
TWI12G1451 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.7e-12 75.9 114 34.2
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 3.1e-11 73.2 97 42.3
CiPaw.01G087900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-10 71.2 136 34.6
TWI36G0193 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.0e-10 70.5 119 32.8
TWI73G0140 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.6e-10 70.1 120 31.7
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-10 69.7 126 38.1
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.4e-10 69.7 116 33.6
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.8e-10 68.9 116 34.5
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.5e-10 68.6 141 36.2
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 7.5e-10 68.6 116 32.8
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-09 67.8 131 35.1
Haze_08599 Corylus avellana HOM05D001576 ORTHO05D000401 1.3e-09 67.8 136 33.1
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.7e-09 67.4 135 32.6
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 1.7e-09 67.4 119 32.8
CiPaw.03G089300 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-09 67.0 86 39.5
CiPaw.01G086600 Carya illinoinensis HOM05D000003 ORTHO05D000167 2.9e-09 66.6 164 31.1
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 66.6 126 37.3
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 66.6 126 37.3
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 66.6 139 36.0
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-09 66.2 143 35.7
TWI38G0936 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.7e-09 66.2 84 41.7
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.4e-09 65.5 126 36.5
TWI75G0594 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.3e-09 65.1 137 31.4
Os03g0433733 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D043824 1.4e-08 64.3 144 34.0
QL11p028487 Quercus lobata HOM05D001576 ORTHO05D000401 1.4e-08 64.3 127 33.9
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-08 63.5 120 34.2
CiPaw.06G026600 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-08 63.5 118 36.4
TWI53G0679 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.4e-08 63.5 118 31.4
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.1e-08 62.8 86 33.7
CiPaw.06G027900 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.4e-08 62.4 118 36.4
QL02p057958 Quercus lobata HOM05D001576 ORTHO05D000401 5.4e-08 62.4 119 32.8
CiPaw.04G113500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.2e-08 61.6 124 33.1
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 1.2e-07 61.2 142 31.7
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 120 33.3
CiPaw.09G088900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 138 32.6
TWI14G0851 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.6e-07 60.8 123 29.3
CiPaw.03G191400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.5 117 31.6
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.7e-07 60.1 131 32.1
CiPaw.09G133100 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 59.7 107 37.4
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.5e-07 59.7 101 33.7
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 3.5e-07 59.7 138 30.4
CiPaw.01G132500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.3 120 35.0
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-07 58.9 138 31.2
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-07 58.9 138 31.2
TAR199G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.0e-07 58.9 79 35.4
CiPaw.01G121200 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.5 117 33.3
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 7.8e-07 58.5 108 34.3
Haze_13466 Corylus avellana HOM05D001576 ORTHO05D000401 7.8e-07 58.5 131 35.1
QL07p025287 Quercus lobata HOM05D001576 ORTHO05D000401 7.8e-07 58.5 130 30.0
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 1.0e-06 58.2 177 31.1
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.4 138 30.4
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.4 120 33.3
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.4 138 30.4
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 1.7e-06 57.4 145 28.3
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 1.7e-06 57.4 145 28.3
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-06 57.0 138 31.2
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-06 57.0 138 31.2
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.3e-06 57.0 141 28.4
CiPaw.10G115900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-06 56.6 138 32.6
Haze_16101 Corylus avellana HOM05D001576 ORTHO05D000401 3.9e-06 56.2 96 37.5
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.9e-06 56.2 147 27.2
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.9e-06 56.2 147 27.2
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.0e-06 55.8 141 34.0
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.0e-06 55.8 137 31.4
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.0e-06 55.8 137 31.4
CiPaw.11G189100 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.5 138 31.2
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 6.6e-06 55.5 116 31.9
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.1 143 32.2
CiPaw.01G118700 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.1 137 30.7
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.1 137 31.4


User provided reference genes

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