Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 0.0e+00 1214.1 641 100.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 7.2e-265 917.1 637 77.6
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 6.8e-255 884.0 646 72.4
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 4.6e-251 871.3 642 74.1
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 3.4e-238 828.6 576 71.7
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.4e-236 822.4 642 70.1
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 3.5e-235 818.5 647 66.5
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 4.7e-232 808.1 640 66.1
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 3.4e-230 802.0 647 67.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 7.6e-230 800.8 640 66.7
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.3e-229 800.0 642 64.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.7e-229 799.7 639 67.0
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.4e-228 796.6 641 67.2
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 2.4e-228 795.8 631 67.7
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 5.1e-226 788.1 589 68.6
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.7e-224 781.6 644 66.5
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 4.0e-223 778.5 619 65.8
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 9.0e-223 777.3 619 65.8
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 5.8e-222 774.6 643 63.5
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.2e-221 772.7 643 64.9
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 8.4e-221 770.8 643 65.6
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.1e-220 770.4 645 62.5
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.4e-220 770.0 639 65.4
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 1.9e-220 769.6 643 63.9
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 7.1e-220 767.7 643 64.5
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 3.9e-218 761.9 597 65.5
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 6.6e-218 761.1 643 65.2
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 5.6e-217 758.1 597 65.3
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 5.6e-217 758.1 647 64.5
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.6e-216 756.5 644 64.4
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 8.1e-216 754.2 594 66.2
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 8.1e-216 754.2 594 66.2
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.1e-215 753.8 650 60.6
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.1e-215 753.8 596 66.8
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 2.4e-215 752.7 651 63.3
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 9.0e-215 750.7 645 62.0
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 3.8e-213 745.3 597 65.7
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.8e-213 745.3 640 62.7
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.4e-212 743.4 686 59.3
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 7.9e-211 737.6 637 63.4
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.3e-210 736.1 642 60.7
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.3e-210 736.1 640 62.0
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 4.3e-209 731.9 573 65.1
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.3e-208 730.3 642 61.8
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 9.0e-207 724.2 643 58.0
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 9.3e-204 714.1 592 61.7
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 9.3e-204 714.1 643 58.9
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 4.6e-203 711.8 613 61.3
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 6.0e-203 711.4 597 60.5
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 7.9e-203 711.1 644 60.1
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.8e-202 709.9 631 60.4
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 6.7e-202 708.0 640 58.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 8.7e-202 707.6 584 61.3
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 3.3e-201 705.7 582 61.5
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.6e-201 704.1 582 61.3
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-200 703.7 634 59.1
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.6e-200 703.4 641 58.5
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.6e-200 703.4 541 65.2
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 3.7e-200 702.2 516 67.6
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.8e-200 701.8 585 60.9
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.8e-199 699.9 650 57.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-198 697.2 585 60.5
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.8e-198 694.9 514 64.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.8e-198 694.9 514 64.8
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 5.8e-198 694.9 516 66.3
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.5e-196 689.5 662 57.1
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 3.5e-195 685.6 650 57.5
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.0e-194 684.1 645 57.7
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 3.9e-194 682.2 640 56.1
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 4.3e-193 678.7 647 56.7
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.6e-192 676.8 662 57.4
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 2.8e-192 676.0 651 59.4
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 8.2e-192 674.5 646 57.1
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 3.1e-191 672.5 595 59.2
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 3.1e-191 672.5 632 56.6
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 6.9e-191 671.4 640 55.6
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 9.0e-191 671.0 647 56.0
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.2e-190 670.6 474 67.5
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.2e-189 666.4 641 55.4
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.2e-189 666.4 634 54.9
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.9e-188 663.3 664 55.1
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.5e-188 662.9 516 62.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 2.1e-187 659.8 599 58.1
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.7e-187 659.4 642 53.7
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 7.4e-185 651.4 560 62.5
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.7e-184 650.2 597 57.8
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 4.8e-184 648.7 485 67.0
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.7e-181 640.2 601 56.9
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.8e-181 639.0 445 66.7
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.9e-180 636.7 635 53.2
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.8e-176 622.1 650 54.6
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-175 620.2 649 53.3
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.1e-175 619.4 525 58.9
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.7e-173 613.6 527 59.8
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.2e-168 596.7 591 53.1
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.4e-167 593.2 647 50.5
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 7.0e-167 591.7 634 52.7
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.1e-155 553.5 382 68.3
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.3e-149 534.3 342 73.7
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 2.5e-148 530.0 652 51.1
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 8.0e-139 498.4 337 69.1
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 3.9e-133 479.6 529 49.1
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 5.6e-124 449.1 483 48.4
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 2.0e-121 440.7 421 51.5
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 2.6e-121 440.3 463 49.0
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.6e-113 413.7 510 43.5
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 5.3e-106 389.4 494 43.7
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.2e-81 308.5 527 34.3
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.0e-80 305.4 675 30.7
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 4.2e-63 246.9 511 33.3
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.6e-49 201.1 489 27.6
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.0e-48 199.1 410 32.9
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 3.6e-30 137.5 100 65.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 3.6e-30 137.5 100 65.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 3.4e-28 131.0 98 64.3
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 4.3e-15 87.4 382 23.8


User provided reference genes

Program Settings