Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1536.2 761 100.0
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1336.2 762 86.4
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1335.9 769 85.8
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1324.3 760 86.2
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1246.9 759 81.2
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1239.6 759 80.6
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1231.1 759 80.2
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1216.8 759 79.4
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1215.3 760 79.2
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1212.2 759 78.7
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1212.2 759 79.4
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1209.1 759 78.7
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1208.4 759 78.7
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1207.6 760 78.4
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1202.6 758 78.4
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1201.0 758 77.3
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1198.7 760 77.4
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1198.7 759 76.4
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1195.3 760 77.2
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1193.7 759 76.7
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1190.3 757 77.3
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1189.5 759 75.9
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1187.6 759 78.3
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1186.0 760 77.5
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1185.2 759 75.9
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1183.7 751 78.2
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1181.8 761 76.6
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1180.2 757 77.0
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1179.9 758 76.0
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1179.1 760 76.3
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1179.1 759 77.3
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1178.7 758 75.2
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1176.8 758 75.5
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1176.8 752 77.9
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1175.6 758 77.3
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1173.7 759 75.2
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1166.0 759 75.0
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1164.8 752 77.5
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1163.7 759 76.0
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1162.1 752 77.3
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1161.7 752 77.1
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1156.7 757 75.6
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1155.2 760 75.1
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1154.0 758 74.9
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1149.8 756 74.7
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1149.0 760 74.9
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1148.3 791 72.8
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1146.7 748 75.3
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1146.7 758 74.1
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1144.8 767 74.2
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1144.0 760 74.9
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1144.0 758 73.9
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1144.0 757 74.1
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1143.3 759 74.2
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1142.5 746 76.5
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1141.7 756 74.3
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1140.9 760 74.6
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1140.6 760 74.7
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1139.8 759 72.7
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1139.8 757 74.2
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1137.5 760 74.1
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1134.0 760 73.0
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1132.5 760 72.9
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1130.9 756 73.7
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1128.2 759 74.0
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1124.4 752 74.3
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1122.1 759 73.0
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1120.5 757 73.6
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1120.1 759 73.5
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1118.6 759 72.6
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1118.2 759 72.3
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1116.3 758 72.8
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1110.9 762 72.8
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1108.2 762 73.1
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1105.1 760 72.5
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1101.3 748 72.9
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1095.1 762 70.2
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1093.6 763 70.5
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1092.8 757 72.4
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1092.0 758 71.0
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1089.7 758 70.7
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1085.1 759 71.0
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1083.9 763 70.2
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 5.2e-312 1074.3 759 71.1
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 5.2e-312 1073.9 755 71.7
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 5.2e-312 1073.5 753 69.2
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 3.6e-311 1071.2 718 73.8
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 4.7e-311 1070.8 723 73.3
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 2.2e-305 1052.0 763 70.9
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 3.3e-301 1038.1 758 67.7
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 1.2e-295 1019.6 758 66.0
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 6.3e-292 1007.3 759 66.4
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 1.6e-290 1002.7 757 65.8
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 2.6e-285 985.3 767 65.4
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 3.5e-282 974.9 757 63.3
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 3.3e-280 968.4 757 62.9
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 3.1e-262 908.7 796 58.7
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 2.3e-241 839.3 586 71.8
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 6.9e-238 827.8 716 58.7
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 1.3e-236 823.5 538 76.2
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 2.3e-209 733.0 659 59.8
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 4.6e-202 708.8 767 49.3
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 6.1e-186 655.2 754 52.1
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 6.1e-186 655.2 768 47.1
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 7.0e-174 615.1 400 77.2
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 3.5e-173 612.8 768 44.5
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 1.3e-124 451.4 1001 31.8
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 8.7e-116 422.2 299 68.9
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 1.1e-75 288.9 191 72.3
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 7.7e-64 249.6 163 74.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 4.1e-17 94.4 65 63.1
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 1.1e-12 79.7 535 21.1
SEGI_36326 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.2e-11 76.3 95 46.3
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.2e-09 68.2 40 77.5
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 7.1e-09 67.0 43 72.1
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 7.1e-09 67.0 43 72.1


User provided reference genes

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