Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.5e-116 422.9 227 100.0
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.7e-65 252.7 231 64.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 4.8e-62 241.9 232 61.6
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 2.9e-59 232.6 226 61.9
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 6.5e-43 178.3 225 48.4
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.1e-39 167.5 226 46.9
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 5.7e-39 165.2 227 50.7
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.6e-36 156.4 234 43.6
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 4.2e-34 149.1 233 44.6
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 8.0e-33 144.8 239 43.1
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 3.0e-32 142.9 235 41.3
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 8.8e-32 141.4 215 43.3
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 2.2e-30 136.7 234 43.2
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 7.0e-29 131.7 226 39.8
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 7.0e-29 131.7 229 39.3
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.6e-28 130.6 229 38.9
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 2.0e-28 130.2 213 40.8
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 2.0e-28 130.2 237 37.6
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.7e-28 129.8 229 39.7
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 4.5e-28 129.0 229 40.2
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 2.2e-27 126.7 233 43.3
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 2.9e-27 126.3 223 42.2
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 5.0e-27 125.6 223 43.9
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.2e-25 120.9 237 37.6
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.4e-24 117.5 222 37.8
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 6.8e-24 115.2 209 35.9
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.2e-23 114.4 231 36.4
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 2.6e-23 113.2 227 41.0
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.4e-23 112.8 246 35.0
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.7e-22 110.5 244 37.7
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 3.7e-22 109.4 204 39.7
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 3.7e-22 109.4 221 35.3
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 4.9e-22 109.0 209 35.9
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 1.4e-21 107.5 225 36.0
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.8e-21 107.1 215 38.6
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 2.4e-21 106.7 220 36.8
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 4.1e-21 105.9 217 38.7
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 5.4e-21 105.5 221 39.4
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 9.1e-21 104.8 227 37.0
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.2e-20 104.4 221 37.6
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 3.5e-20 102.8 209 34.9
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 3.5e-20 102.8 232 37.9
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 4.5e-20 102.4 228 33.8
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 5.9e-20 102.1 234 36.8
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 1.0e-19 101.3 216 36.1
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.3e-19 100.9 227 35.7
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 1.7e-19 100.5 240 37.1
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.7e-19 100.5 216 37.0
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.3e-19 100.1 228 36.0
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 2.3e-19 100.1 220 35.5
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 2.3e-19 100.1 234 35.5
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 2.9e-19 99.8 226 34.5
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 3.8e-19 99.4 221 33.9
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.8e-19 99.4 234 36.3
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 8.6e-19 98.2 212 36.3
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 8.6e-19 98.2 228 35.1
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 1.5e-18 97.4 227 34.8
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 1.9e-18 97.1 220 35.0
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 1.9e-18 97.1 220 33.6
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.9e-18 97.1 212 34.0
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 3.3e-18 96.3 237 34.2
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 5.6e-18 95.5 240 36.2
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 7.2e-18 95.1 212 34.4
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 7.2e-18 95.1 209 35.4
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 9.5e-18 94.7 225 32.4
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 1.2e-17 94.4 213 37.6
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 2.1e-17 93.6 228 33.8
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 2.8e-17 93.2 220 33.6
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 3.6e-17 92.8 214 37.4
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 3.6e-17 92.8 217 31.8
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 4.7e-17 92.4 228 34.2
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 6.1e-17 92.0 223 33.2
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 8.0e-17 91.7 228 33.8
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 8.0e-17 91.7 219 37.0
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 8.0e-17 91.7 221 33.5
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 8.0e-17 91.7 216 33.3
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.0e-16 91.3 227 33.9
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.0e-16 91.3 236 33.5
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 1.0e-16 91.3 216 34.7
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.4e-16 90.9 240 32.1
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 1.4e-16 90.9 231 33.8
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 1.8e-16 90.5 222 36.0
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 1.8e-16 90.5 224 32.1
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.8e-16 90.5 214 31.3
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 1.8e-16 90.5 225 31.6
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.3e-16 90.1 227 33.9
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.0e-16 89.7 226 33.6
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 4.0e-16 89.4 217 34.6
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 4.0e-16 89.4 215 32.1
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 5.2e-16 89.0 238 32.8
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 5.2e-16 89.0 228 33.8
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 5.2e-16 89.0 228 33.8
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 5.2e-16 89.0 228 33.8
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 5.2e-16 89.0 214 30.4
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 6.8e-16 88.6 218 33.9
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 6.8e-16 88.6 217 35.0
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 8.9e-16 88.2 227 33.9
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 1.2e-15 87.8 218 32.6
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.2e-15 87.8 217 31.8
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 1.5e-15 87.4 219 29.7
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.0e-15 87.0 219 32.9
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 4.4e-15 85.9 240 31.7
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 4.4e-15 85.9 216 36.1
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 7.5e-15 85.1 217 35.9
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.3e-14 84.3 219 36.5
Migut.A00919 Erythranthe guttata HOM05D002977 ORTHO05D003225 2.2e-14 83.6 222 30.2
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.2e-14 83.6 222 31.1
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 2.9e-14 83.2 218 32.1
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 3.7e-14 82.8 219 32.0
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 8.3e-14 81.6 226 31.9
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 8.3e-14 81.6 224 32.1
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 1.8e-13 80.5 227 32.2
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 2.4e-13 80.1 229 31.0
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.2e-13 79.7 226 34.5
ATR0757G071 Amborella trichopoda HOM05D003485 ORTHO05D004004 4.1e-13 79.3 220 31.4
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 4.1e-13 79.3 238 28.6
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 5.4e-13 79.0 227 33.0
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 7.0e-13 78.6 176 35.2
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 7.0e-13 78.6 230 32.6
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.2e-12 77.8 210 32.4
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.6e-12 77.4 228 32.9
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 2.7e-12 76.6 215 29.8
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 3.5e-12 76.3 236 33.1
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 3.5e-12 76.3 230 30.4
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 5.9e-12 75.5 219 32.4
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 5.9e-12 75.5 229 37.1
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 7.8e-12 75.1 214 29.9
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 7.8e-12 75.1 228 32.5
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 1.0e-11 74.7 197 33.0
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.7e-11 73.9 226 29.2
Eucgr.E00527 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.7e-11 73.9 129 34.9
arahy.Tifrunner.gnm1.ann1.ELA92E Arachis hypogaea HOM05D002977 ORTHO05D003225 3.0e-11 73.2 228 28.5
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 5.0e-11 72.4 219 31.1
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 8.6e-11 71.6 131 38.9
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.9e-10 70.5 267 28.5
arahy.Tifrunner.gnm1.ann1.BQI3IB Arachis hypogaea HOM05D002977 ORTHO05D003225 1.9e-10 70.5 229 28.8
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 2.5e-10 70.1 214 31.3
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 3.3e-10 69.7 233 32.6
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.3e-10 69.7 131 37.4
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 4.3e-10 69.3 126 39.7
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 9.5e-10 68.2 131 38.9
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 6.2e-09 65.5 224 29.9
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 1.4e-08 64.3 220 27.7
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 1.8e-08 63.9 217 27.2
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 1.8e-08 63.9 231 28.1
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 3.1e-08 63.2 223 27.4
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 4.0e-08 62.8 232 30.6
TAR369G0025 Trochodendron aralioides HOM05D003485 ORTHO05D004004 5.2e-08 62.4 220 30.9
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.6e-07 60.1 103 37.9
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 3.4e-07 59.7 220 27.3
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 3.4e-07 59.7 227 27.3
EL10Ac7g16972 Beta vulgaris HOM05D003485 ORTHO05D004004 4.4e-07 59.3 232 26.3
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 4.4e-07 59.3 219 27.4
MD12G1019500 Malus domestica HOM05D003485 ORTHO05D004004 4.4e-07 59.3 235 29.8
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 7.5e-07 58.5 213 27.2
VMungo0720G2646 Vigna mungo HOM05D003485 ORTHO05D004004 7.5e-07 58.5 221 28.1
Glyma.01G215900 Glycine max HOM05D002977 ORTHO05D003225 9.8e-07 58.2 232 30.2
Lalb_Chr01g0018291 Lupinus albus HOM05D003485 ORTHO05D004004 9.8e-07 58.2 225 28.9
Sp7g21110 Schrenkiella parvula HOM05D002977 ORTHO05D003225 9.8e-07 58.2 220 30.9
Cpa.g.sc74.83 Carica papaya HOM05D002977 ORTHO05D003225 1.3e-06 57.8 181 27.6
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.3e-06 57.8 213 26.8
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.3e-06 57.8 213 26.8
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 1.7e-06 57.4 134 32.8
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 2.2e-06 57.0 130 34.6
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 2.9e-06 56.6 228 28.1
Sc01g0008790 Simmondsia chinensis HOM05D002977 ORTHO05D003225 2.9e-06 56.6 80 35.0
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 3.7e-06 56.2 228 26.8
PSO478G2989 Papaver somniferum HOM05D002977 ORTHO05D003225 3.7e-06 56.2 260 28.1
PSO782G0819 Papaver somniferum HOM05D002977 ORTHO05D003225 3.7e-06 56.2 263 26.6
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 4.9e-06 55.8 130 33.1
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 6.4e-06 55.5 173 30.6
Glyma.10G067100 Glycine max HOM05D003485 ORTHO05D004004 6.4e-06 55.5 233 30.0
Prupe.7G115800 Prunus persica HOM05D003485 ORTHO05D004004 6.4e-06 55.5 242 26.0


User provided reference genes

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