Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 2.3e-76 288.9 153 100.0
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 2.4e-49 199.1 149 69.8
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 2.4e-41 172.6 150 60.7
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 3.5e-40 168.7 150 63.3
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 2.3e-39 166.0 146 56.2
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 2.9e-39 165.6 144 62.5
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 3.8e-39 165.2 152 55.9
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 3.8e-39 165.2 148 61.5
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 3.8e-39 165.2 150 59.3
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 5.0e-39 164.9 151 60.3
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 1.9e-38 162.9 148 61.5
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 2.5e-38 162.5 145 57.9
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 3.3e-38 162.2 153 59.5
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 7.3e-38 161.0 162 53.7
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 7.3e-38 161.0 148 58.1
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 7.3e-38 161.0 151 58.9
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 1.2e-37 160.2 153 57.5
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.6e-37 159.8 154 57.1
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 1.6e-37 159.8 150 54.0
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 2.1e-37 159.5 146 62.3
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.1e-37 159.5 158 55.7
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 2.8e-37 159.1 150 59.3
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 3.6e-37 158.7 153 55.6
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 8.0e-37 157.5 152 50.7
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 8.0e-37 157.5 147 55.1
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 8.0e-37 157.5 147 55.8
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 8.0e-37 157.5 147 55.8
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 8.0e-37 157.5 147 55.1
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 8.0e-37 157.5 150 57.3
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.0e-36 157.1 151 53.0
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.4e-36 156.8 150 52.0
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.4e-36 156.8 152 55.3
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 2.3e-36 156.0 149 55.7
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 3.0e-36 155.6 151 57.0
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 3.0e-36 155.6 151 57.0
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 3.0e-36 155.6 153 60.8
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 3.0e-36 155.6 145 56.6
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 4.0e-36 155.2 171 52.0
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 4.0e-36 155.2 152 55.9
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 6.8e-36 154.5 150 50.7
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 6.8e-36 154.5 151 54.3
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 8.9e-36 154.1 145 54.5
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.5e-35 153.3 149 51.7
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.0e-35 152.9 151 51.7
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 2.6e-35 152.5 158 53.2
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.6e-35 152.5 158 53.2
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.6e-35 152.5 151 52.3
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 3.4e-35 152.1 149 57.0
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 4.4e-35 151.8 146 58.2
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 4.4e-35 151.8 149 54.4
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 5.7e-35 151.4 148 53.4
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 7.5e-35 151.0 148 54.7
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 9.8e-35 150.6 150 52.7
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 2.2e-34 149.4 147 53.7
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 2.9e-34 149.1 155 54.2
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 3.7e-34 148.7 145 50.3
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 6.4e-34 147.9 155 52.9
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 8.3e-34 147.5 150 52.7
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.1e-33 147.1 159 50.3
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 1.4e-33 146.7 146 54.1
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 1.8e-33 146.4 149 51.7
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 1.8e-33 146.4 146 52.7
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 2.4e-33 146.0 150 50.0
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 2.4e-33 146.0 149 54.4
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 2.4e-33 146.0 146 52.7
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 2.4e-33 146.0 146 52.7
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.4e-33 146.0 159 50.3
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 5.4e-33 144.8 147 51.7
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 5.4e-33 144.8 147 51.7
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 5.4e-33 144.8 145 53.8
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 5.4e-33 144.8 147 53.7
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 7.0e-33 144.4 145 52.4
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 7.0e-33 144.4 145 52.4
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 7.0e-33 144.4 156 51.9
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 9.2e-33 144.1 156 48.7
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 1.2e-32 143.7 146 52.1
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.2e-32 143.7 146 51.4
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 1.6e-32 143.3 152 51.3
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 2.0e-32 142.9 152 51.3
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 2.0e-32 142.9 166 49.4
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 2.7e-32 142.5 148 52.7
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 4.6e-32 141.7 158 48.7
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 5.9e-32 141.4 159 47.2
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 7.8e-32 141.0 157 48.4
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 1.3e-31 140.2 153 49.7
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 2.3e-31 139.4 145 51.0
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 3.0e-31 139.0 148 48.6
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 5.0e-31 138.3 145 50.3
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 6.6e-31 137.9 145 51.7
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 6.6e-31 137.9 148 50.0
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 2.5e-30 136.0 155 48.4
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 5.6e-30 134.8 148 46.6
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 1.2e-29 133.7 158 48.7
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.2e-29 133.7 148 48.6
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 1.6e-29 133.3 149 47.7
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 1.6e-29 133.3 149 47.7
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 2.1e-29 132.9 147 50.3
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 2.8e-29 132.5 158 46.8
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 3.6e-29 132.1 157 46.5
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 4.7e-29 131.7 150 46.7
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 1.0e-28 130.6 149 47.7
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 1.0e-28 130.6 149 47.7
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 2.3e-28 129.4 149 47.0
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 8.9e-28 127.5 146 44.5
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 2.6e-27 125.9 147 46.9
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 9.8e-27 124.0 154 48.1
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 2.4e-25 119.4 166 45.2
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 7.0e-25 117.9 157 41.4
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 1.6e-24 116.7 148 42.6
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 3.5e-24 115.5 160 42.5
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.6e-24 115.2 159 42.8
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 7.8e-24 114.4 159 42.8
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 1.7e-23 113.2 156 42.3
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 2.3e-23 112.8 125 52.0
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 3.9e-23 112.1 159 41.5
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 1.5e-22 110.2 146 41.8
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 2.5e-22 109.4 156 42.3
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 3.3e-22 109.0 158 41.8
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 9.5e-22 107.5 170 37.1
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 9.5e-22 107.5 170 37.1
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 9.5e-22 107.5 110 58.2
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 3.6e-21 105.5 110 50.0
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 6.2e-21 104.8 113 49.6
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 8.1e-21 104.4 173 38.7
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 1.1e-20 104.0 171 45.0
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.3e-20 102.8 110 49.1
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 2.3e-20 102.8 168 39.3
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 5.2e-20 101.7 110 48.2
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 6.8e-20 101.3 158 38.0
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 1.5e-19 100.1 163 35.6
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 2.0e-19 99.8 175 36.0
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 3.4e-19 99.0 160 36.2
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 3.4e-19 99.0 171 39.2
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 4.4e-19 98.6 142 38.0
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 5.8e-19 98.2 148 41.2
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 1.3e-18 97.1 159 40.3
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 1.7e-18 96.7 163 35.6
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 2.9e-18 95.9 148 42.6
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 2.9e-18 95.9 151 39.7
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 8.3e-18 94.4 146 36.3
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 1.4e-17 93.6 142 37.3
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 2.4e-17 92.8 161 36.0
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 3.2e-17 92.4 147 40.1
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 3.2e-17 92.4 151 39.7
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 3.2e-17 92.4 151 35.8
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 2.1e-16 89.7 148 39.9
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.7e-15 86.7 143 36.4
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 6.6e-15 84.7 100 46.0
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.1e-14 84.0 96 43.8
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 7.3e-14 81.3 65 58.5
Lalb_Chr11g0067791 Lupinus albus HOM05D004173 ORTHO05D004885 1.2e-13 80.5 75 60.0
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 1.2e-13 80.5 130 39.2
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 3.4e-11 72.4 151 32.5
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 1.7e-10 70.1 151 31.8
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 2.9e-10 69.3 76 47.4
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 8.4e-10 67.8 93 45.2
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 1.1e-09 67.4 157 29.9
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 3.2e-09 65.9 79 45.6
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 3.2e-09 65.9 157 29.9
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.2e-08 63.9 183 30.6
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 1.6e-08 63.5 159 29.6


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