Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G305700 Carya illinoinensis HOM05D009064 ORTHO05D010640 8.9e-66 253.4 127 100.0
Haze_17348 Corylus avellana HOM05D009064 ORTHO05D010640 3.3e-20 102.1 128 52.3
Sabra13G0079500 Salix brachista HOM05D009064 ORTHO05D010640 4.2e-15 85.1 114 43.0
Manes.07G140000 Manihot esculenta HOM05D009064 ORTHO05D010640 3.6e-14 82.0 132 47.0
QL08p064693 Quercus lobata HOM05D026914 ORTHO05D010640 4.6e-14 81.6 122 46.7
Cfa001215 Carpinus fangiana HOM05D009064 ORTHO05D010640 7.9e-14 80.9 117 49.6
Hma1.2p1_2086F.1_g313715 Hydrangea macrophylla HOM05D009064 ORTHO05D010640 7.9e-14 80.9 127 42.5
Potri.013G083500 Populus trichocarpa HOM05D009064 ORTHO05D010640 1.4e-13 80.1 127 39.4
Rhsim03G0151100 Rhododendron simsii HOM05D009064 ORTHO05D010640 2.3e-13 79.3 128 43.0
TAR623G0979 Trochodendron aralioides HOM05D009064 ORTHO05D010640 8.8e-13 77.4 111 45.0
QL02p068966 Quercus lobata HOM05D026914 ORTHO05D010640 3.3e-12 75.5 122 44.3
Duzib114G0015 Durio zibethinus HOM05D009064 ORTHO05D010640 1.3e-11 73.6 111 44.1
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 4.8e-11 71.6 117 43.6
COL.COLO4_19449 Corchorus olitorius HOM05D009064 ORTHO05D010640 6.3e-11 71.2 114 41.2
Glyma.06G144000 Glycine max HOM05D009064 ORTHO05D010640 6.3e-11 71.2 115 44.3
Dinv26058 Davidia involucrata HOM05D009064 ORTHO05D010640 4.1e-10 68.6 81 50.6
Thecc.10G183500 Theobroma cacao HOM05D009064 ORTHO05D010640 6.9e-10 67.8 128 38.3
QL08p064721 Quercus lobata HOM05D026914 ORTHO05D010640 2.0e-09 66.2 121 43.0
QL08p064726 Quercus lobata HOM05D026914 ORTHO05D010640 3.4e-09 65.5 111 44.1
Prupe.2G262900 Prunus persica HOM05D025368 ORTHO05D010640 5.9e-09 64.7 122 38.5
Ciclev10033100m.g Citrus clementina HOM05D009064 ORTHO05D010640 1.7e-08 63.2 131 38.9
Gorai.013G007900 Gossypium raimondii HOM05D009064 ORTHO05D010640 2.9e-08 62.4 124 37.9
Nn2g10339 Nelumbo nucifera HOM05D009064 ORTHO05D010640 2.9e-08 62.4 121 35.5
Phvul.009G142200 Phaseolus vulgaris HOM05D009064 ORTHO05D010640 3.8e-08 62.0 129 38.8
Gohir.D13G007500 Gossypium hirsutum HOM05D009064 ORTHO05D010640 6.5e-08 61.2 124 37.1
Gohir.A13G007400 Gossypium hirsutum HOM05D009064 ORTHO05D010640 1.1e-07 60.5 125 37.6
CSS0018674 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 1.2e-06 57.0 128 42.2
FAN06G3295 Fragaria x ananassa HOM05D025368 ORTHO05D010640 1.6e-06 56.6 121 38.0
RcHm_v2.0_Chr1g0372031 Rosa chinensis HOM05D025368 ORTHO05D010640 2.7e-06 55.8 124 39.5
Glyma.04G221450 Glycine max HOM05D009064 ORTHO05D010640 4.7e-06 55.1 31 77.4
Atru.chr12.161 Acer truncatum HOM05D009064 ORTHO05D010640 7.9e-06 54.3 107 37.4
FAN03G3397 Fragaria x ananassa HOM05D025368 ORTHO05D010640 7.9e-06 54.3 122 39.3


User provided reference genes

Program Settings