Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.1e-122 443.4 236 100.0
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 5.5e-93 344.7 222 83.3
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.5e-90 336.7 236 79.7
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 5.7e-90 334.7 220 82.3
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 3.3e-74 282.3 254 64.6
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 5.0e-70 268.5 256 62.1
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 3.2e-69 265.8 257 59.9
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 7.2e-69 264.6 252 63.9
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.1e-68 263.1 258 61.6
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.7e-68 262.7 254 61.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 6.1e-68 261.5 256 59.4
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 5.7e-66 255.0 248 62.5
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 4.1e-64 248.8 254 60.2
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 3.5e-63 245.7 257 55.6
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.7e-62 243.4 258 57.8
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.2e-61 239.2 258 56.6
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 5.5e-61 238.4 258 56.6
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.5e-61 238.4 258 56.6
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.1e-60 236.5 257 56.0
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.8e-59 233.4 252 57.9
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 6.7e-59 231.5 241 60.6
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.1e-58 230.7 238 59.7
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.1e-58 230.7 257 56.8
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.5e-58 230.3 240 57.9
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 3.3e-58 229.2 241 60.2
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 4.4e-58 228.8 261 57.1
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 5.7e-58 228.4 239 56.9
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.2e-57 226.5 258 55.8
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.2e-57 226.5 261 56.7
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 2.8e-57 226.1 255 56.1
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.8e-57 226.1 245 60.0
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 2.8e-57 226.1 245 60.0
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.8e-57 226.1 251 58.2
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.7e-57 225.7 245 60.0
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 8.2e-57 224.6 257 57.2
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 1.1e-56 224.2 259 53.3
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.4e-56 223.8 252 56.7
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.8e-56 223.4 260 56.2
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 3.1e-56 222.6 244 56.6
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 4.5e-55 218.8 250 56.0
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 7.7e-55 218.0 256 55.5
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 7.7e-55 218.0 249 56.2
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 1.1e-53 214.2 255 55.7
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 1.9e-53 213.4 255 53.3
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 2.5e-53 213.0 243 57.6
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.2e-52 210.7 246 56.5
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 1.6e-52 210.3 257 53.7
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 6.1e-52 208.4 238 56.3
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 1.4e-51 207.2 250 55.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.2e-50 204.1 236 53.4
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 1.5e-50 203.8 255 52.2
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.5e-50 203.8 241 54.4
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.0e-50 203.4 233 55.4
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.1e-48 197.6 247 50.2
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 9.1e-48 194.5 211 57.3
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 1.2e-47 194.1 254 50.8
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 2.0e-47 193.4 253 50.2
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 3.5e-47 192.6 244 52.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 3.5e-47 192.6 236 50.4
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 4.5e-47 192.2 243 53.9
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 4.5e-47 192.2 265 50.6
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.7e-46 190.3 205 57.6
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 8.5e-46 188.0 224 52.7
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 4.2e-45 185.7 242 48.3
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 7.2e-45 184.9 237 52.3
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.6e-44 183.7 207 56.0
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 8.0e-44 181.4 146 69.2
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 5.2e-43 178.7 215 53.0
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.5e-42 177.2 236 48.3
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 7.5e-42 174.9 241 49.8
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 2.2e-41 173.3 258 48.4
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 3.7e-41 172.6 207 54.6
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 6.3e-41 171.8 212 47.6
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.8e-40 170.2 242 49.6
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.5e-39 166.0 239 48.5
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 5.9e-39 165.2 240 48.3
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 5.9e-39 165.2 105 79.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 5.9e-39 165.2 105 79.0
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 7.7e-39 164.9 237 43.0
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 2.5e-37 159.8 214 50.9
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 2.1e-36 156.8 237 44.7
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.8e-36 156.4 238 44.5
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 4.7e-36 155.6 238 44.5
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 6.1e-36 155.2 168 54.8
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 6.1e-36 155.2 163 58.3
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 3.0e-35 152.9 220 48.6
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 4.0e-35 152.5 237 44.7
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 4.0e-35 152.5 245 46.1
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 5.2e-35 152.1 237 45.1
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 6.8e-35 151.8 122 64.8
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 8.9e-35 151.4 125 64.0
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 8.9e-35 151.4 125 64.0
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 1.2e-34 151.0 125 64.0
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-34 150.6 114 66.7
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-34 150.6 114 66.7
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.5e-34 150.6 114 66.7
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.5e-34 150.6 114 66.7
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 2.6e-34 149.8 205 46.8
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.6e-34 149.8 143 58.0
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 6.4e-33 145.2 114 64.9
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.8e-32 143.7 95 78.9
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 5.9e-31 138.7 172 53.5
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.3e-30 137.5 130 59.2
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 6.6e-30 135.2 139 56.8
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 9.2e-24 114.8 83 67.5
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 4.6e-23 112.5 200 42.0
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 6.2e-20 102.1 202 36.6
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 4.1e-16 89.4 222 36.5
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 4.1e-08 62.8 118 35.6
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 5.4e-08 62.4 163 37.4
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 2.1e-07 60.5 55 56.4
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 2.3e-06 57.0 86 38.4


User provided reference genes

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