Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 8.8e-254 879.8 442 100.0
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 2.2e-204 715.7 440 81.8
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 2.4e-195 685.6 443 78.1
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 6.0e-178 627.9 443 69.3
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 3.1e-174 615.5 443 69.1
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 3.0e-169 599.0 445 66.5
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 2.0e-165 586.3 444 64.9
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 4.7e-162 575.1 450 65.8
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.0e-161 573.9 433 65.1
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.3e-159 567.0 442 64.5
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 2.2e-159 566.2 453 64.9
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 2.2e-159 566.2 442 64.9
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 3.1e-158 562.4 434 65.7
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 9.1e-158 560.8 433 65.4
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 2.0e-157 559.7 433 65.1
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 7.2e-155 551.2 447 61.3
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 9.4e-155 550.8 432 64.4
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 3.9e-153 545.4 431 62.4
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.1e-152 543.9 433 64.2
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 3.7e-151 538.9 442 61.8
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-151 538.5 434 62.4
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-151 538.5 434 62.4
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 1.8e-150 536.6 444 62.2
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 2.4e-150 536.2 460 59.8
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 4.1e-150 535.4 432 61.8
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 9.1e-150 534.3 431 63.1
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.2e-149 533.9 443 62.3
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.6e-149 532.7 431 61.9
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 3.5e-149 532.3 432 60.6
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 1.1e-147 527.3 438 61.0
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.5e-147 526.9 435 61.8
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 2.5e-147 526.2 433 63.7
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 3.2e-147 525.8 436 59.4
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 2.7e-146 522.7 448 62.1
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 2.7e-146 522.7 440 58.9
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 4.7e-146 521.9 440 58.4
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 8.0e-146 521.2 436 62.6
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 1.8e-145 520.0 434 59.2
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 3.0e-145 519.2 434 60.4
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 5.2e-145 518.5 432 60.9
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 8.8e-145 517.7 437 60.4
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.0e-144 516.5 434 60.4
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 7.5e-144 514.6 460 58.0
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.8e-143 512.7 440 60.2
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 5.3e-142 508.4 442 59.0
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.2e-141 507.3 445 60.7
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.6e-141 506.9 425 59.5
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 3.5e-141 505.8 442 57.5
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 3.5e-141 505.8 442 58.6
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 3.5e-141 505.8 426 59.2
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 5.9e-141 505.0 432 58.3
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 5.0e-140 501.9 435 60.7
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.6e-138 496.9 455 57.8
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 8.8e-137 491.1 443 59.8
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 1.2e-136 490.7 432 57.6
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 2.0e-136 490.0 436 55.5
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 2.0e-136 490.0 442 57.7
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 4.4e-136 488.8 431 58.7
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 5.7e-136 488.4 442 57.9
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 1.3e-135 487.3 436 58.0
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 1.3e-135 487.3 427 56.9
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.7e-135 486.9 418 58.9
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 3.7e-135 485.7 496 53.2
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.6e-133 480.3 418 58.1
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 3.5e-133 479.2 439 56.5
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 1.3e-132 477.2 428 54.9
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 5.5e-131 471.9 422 57.8
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.6e-130 470.3 432 54.4
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 1.6e-130 470.3 432 54.2
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.6e-130 470.3 439 56.9
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 2.1e-130 469.9 313 71.9
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.0e-129 467.6 423 56.0
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.4e-129 467.2 424 55.7
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 2.3e-129 466.5 422 54.7
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 5.2e-129 465.3 432 58.1
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 8.9e-129 464.5 431 54.1
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 3.4e-128 462.6 427 54.8
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 3.4e-128 462.6 416 57.7
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 5.7e-128 461.8 483 54.2
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 9.8e-128 461.1 432 56.0
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.3e-127 460.7 425 54.1
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 4.1e-126 455.7 442 55.2
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 7.8e-125 451.4 428 54.0
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 6.6e-124 448.4 372 59.4
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 8.6e-124 448.0 429 52.4
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 3.3e-123 446.0 442 55.0
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 8.0e-122 441.4 435 51.7
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 8.0e-122 441.4 427 53.6
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 5.2e-121 438.7 404 55.7
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.5e-120 437.2 378 59.5
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 7.8e-117 424.9 421 55.6
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 5.0e-116 422.2 414 51.2
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 7.3e-115 418.3 301 66.8
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 4.7e-114 415.6 449 50.8
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 2.6e-104 383.3 418 48.3
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.3e-103 380.9 422 47.4
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.6e-101 374.0 321 60.1
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.1e-99 367.9 432 46.3
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 2.1e-93 347.1 434 46.1
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 6.0e-93 345.5 344 52.9
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 7.6e-88 328.6 427 41.7
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 2.7e-69 266.9 156 84.0
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 4.5e-64 249.6 394 40.9
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.1e-57 228.4 257 49.0
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 2.6e-56 223.8 148 68.9
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 4.5e-56 223.0 271 45.8
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.9e-55 220.3 155 69.7
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.2e-53 214.9 382 35.3
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 5.7e-51 206.1 430 33.3
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.8e-49 201.1 275 38.2
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 2.9e-47 193.7 222 49.1
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 5.0e-47 193.0 351 32.8
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 1.2e-45 188.3 305 34.4
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 2.7e-45 187.2 148 61.5
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.1e-43 181.8 141 58.9
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 5.2e-36 156.4 160 52.5
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 2.2e-34 151.0 166 46.4
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 4.2e-30 136.7 294 29.6
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 4.4e-19 100.1 253 24.5
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 8.6e-15 85.9 65 58.5
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.1e-14 85.5 65 60.0
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 4.7e-13 80.1 113 39.8
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 1.1e-09 68.9 159 27.7


User provided reference genes

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