Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G293100 Carya illinoinensis HOM05D006892 ORTHO05D008592 3.7e-44 181.0 83 100.0
Haze_18710 Corylus avellana HOM05D006892 ORTHO05D008592 3.8e-25 117.9 80 63.8
Haze_17148 Corylus avellana HOM05D000015 ORTHO05D000270 7.2e-24 113.6 79 62.0
Haze_17150 Corylus avellana HOM05D006892 ORTHO05D008592 2.1e-23 112.1 82 59.8
Cfa001402 Carpinus fangiana HOM05D006892 ORTHO05D008592 5.2e-22 107.5 81 58.0
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 2.5e-16 88.6 80 53.8
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.6e-15 85.9 68 55.9
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 8.0e-15 83.6 75 48.0
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 1.0e-14 83.2 78 53.8
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 3.0e-14 81.6 83 49.4
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 4.0e-14 81.3 83 44.6
Sabra08G0045200 Salix brachista HOM05D006892 ORTHO05D008592 6.8e-14 80.5 68 54.4
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 6.8e-14 80.5 81 51.9
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 8.8e-14 80.1 80 47.5
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 8.8e-14 80.1 80 47.5
Sabra10G0151100 Salix brachista HOM05D006892 ORTHO05D008592 2.0e-13 79.0 71 49.3
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 2.6e-13 78.6 71 49.3
Phvul.001G238200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 4.4e-13 77.8 80 47.5
Haze_20883 Corylus avellana HOM05D006892 ORTHO05D008592 5.7e-13 77.4 73 45.2
Haze_20892 Corylus avellana HOM05D006892 ORTHO05D008592 5.7e-13 77.4 73 45.2
Gorai.011G273300 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.3e-12 76.3 77 49.4
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.3e-12 76.3 83 41.0
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 1.3e-12 76.3 78 50.0
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 3.7e-12 74.7 82 41.5
Gohir.A10G225300 Gossypium hirsutum HOM05D006892 ORTHO05D008592 3.7e-12 74.7 84 48.8
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 4.8e-12 74.3 83 39.8
Potri.008G061600 Populus trichocarpa HOM05D006892 ORTHO05D008592 6.3e-12 73.9 40 70.0
COL.COLO4_36543 Corchorus olitorius HOM05D006892 ORTHO05D008592 8.3e-12 73.6 71 53.5
Gohir.D10G238364 Gossypium hirsutum HOM05D006892 ORTHO05D008592 8.3e-12 73.6 83 47.0
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 1.1e-11 73.2 84 48.8
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.1e-11 73.2 77 49.4
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.1e-11 73.2 77 49.4
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 1.1e-11 73.2 80 43.8
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.4e-11 72.8 77 49.4
CSS0011916 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.8e-11 72.4 81 46.9
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 1.8e-11 72.4 69 47.8
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 1.8e-11 72.4 80 38.8
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 3.1e-11 71.6 68 45.6
TPR.G32561 Trifolium pratense HOM05D006892 ORTHO05D008592 4.1e-11 71.2 69 40.6
Manes.07G122400 Manihot esculenta HOM05D006892 ORTHO05D008592 5.4e-11 70.9 83 43.4
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 7.0e-11 70.5 80 37.5
Glyma.18G033400 Glycine max HOM05D006892 ORTHO05D008592 9.1e-11 70.1 77 46.8
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 9.1e-11 70.1 37 67.6
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 9.1e-11 70.1 72 44.4
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.2e-10 69.7 80 43.8
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.2e-10 69.7 73 47.9
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.2e-10 69.7 73 47.9
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 1.2e-10 69.7 80 42.5
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 1.6e-10 69.3 71 47.9
Lj6g0007525 Lotus japonicus HOM05D006892 ORTHO05D008592 1.6e-10 69.3 75 48.0
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 2.0e-10 68.9 83 43.4
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 2.0e-10 68.9 83 41.0
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 3.5e-10 68.2 72 37.5
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 3.5e-10 68.2 68 42.6
Medtr3g069540 Medicago truncatula HOM05D006892 ORTHO05D008592 7.7e-10 67.0 78 42.3
Medtr4g019640 Medicago truncatula HOM05D006892 ORTHO05D008592 7.7e-10 67.0 69 44.9
Thecc.10G031400 Theobroma cacao HOM05D006892 ORTHO05D008592 7.7e-10 67.0 82 45.1
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 1.0e-09 66.6 75 41.3
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 1.0e-09 66.6 74 47.3
SalBow6G4181 Salvia bowleyana HOM05D061281 ORTHO05D008592 1.0e-09 66.6 73 41.1
SalBow6G4537 Salvia bowleyana HOM05D061281 ORTHO05D008592 1.0e-09 66.6 73 41.1
Atru.chr12.266 Acer truncatum HOM05D006892 ORTHO05D008592 1.7e-09 65.9 87 47.1
Eucgr.G02997 Eucalyptus grandis HOM05D006892 ORTHO05D008592 1.7e-09 65.9 69 44.9
CSS0014654 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.2e-09 65.5 84 42.9
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 2.9e-09 65.1 87 40.2
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 2.9e-09 65.1 35 71.4
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 2.9e-09 65.1 68 42.6
arahy.Tifrunner.gnm1.ann1.71B432 Arachis hypogaea HOM05D006892 ORTHO05D008592 3.8e-09 64.7 72 44.4
arahy.Tifrunner.gnm1.ann1.AC77RP Arachis hypogaea HOM05D006892 ORTHO05D008592 3.8e-09 64.7 72 44.4
Cpa.g.sc56.60 Carica papaya HOM05D006892 ORTHO05D008592 3.8e-09 64.7 80 40.0
Psat7g241320 Pisum sativum HOM05D006892 ORTHO05D008592 3.8e-09 64.7 69 42.0
Manes.10G021300 Manihot esculenta HOM05D006892 ORTHO05D008592 8.5e-09 63.5 74 41.9
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.1e-08 63.2 80 38.8
arahy.Tifrunner.gnm1.ann1.J5YN7E Arachis hypogaea HOM05D006892 ORTHO05D008592 1.5e-08 62.8 81 43.2
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea HOM05D006892 ORTHO05D008592 1.5e-08 62.8 34 64.7
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea HOM05D006892 ORTHO05D008592 1.5e-08 62.8 34 64.7
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.5e-08 62.8 68 41.2
Manes.08G082100 Manihot esculenta HOM05D006892 ORTHO05D008592 1.5e-08 62.8 74 40.5
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 1.5e-08 62.8 80 40.0
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 1.5e-08 62.8 80 38.8
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.9e-08 62.4 80 37.5
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 1.9e-08 62.4 78 41.0
PGSC0003DMG400024270 Solanum tuberosum HOM05D006892 ORTHO05D008592 1.9e-08 62.4 74 40.5
Sabra06G0070000 Salix brachista HOM05D006892 ORTHO05D008592 2.5e-08 62.0 37 62.2
Potri.006G092300 Populus trichocarpa HOM05D006892 ORTHO05D008592 3.2e-08 61.6 35 62.9
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.2e-08 61.2 35 57.1
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 4.2e-08 61.2 83 41.0
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.5e-08 60.8 80 37.5
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 5.5e-08 60.8 80 37.5
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 5.5e-08 60.8 34 64.7
Potri.016G103900 Populus trichocarpa HOM05D006892 ORTHO05D008592 5.5e-08 60.8 34 64.7
arahy.Tifrunner.gnm1.ann1.F5D7CA Arachis hypogaea HOM05D006892 ORTHO05D008592 7.2e-08 60.5 77 41.6
HanXRQChr05g0156901 Helianthus annuus HOM05D006892 ORTHO05D008592 7.2e-08 60.5 36 55.6
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 9.4e-08 60.1 80 36.2
Sopen09g006180 Solanum pennellii HOM05D006892 ORTHO05D008592 9.4e-08 60.1 80 46.2
Actinidia13165 Actinidia chinensis HOM05D006892 ORTHO05D008592 1.6e-07 59.3 75 38.7
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.6e-07 59.3 87 43.7
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.6e-07 59.3 87 43.7
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.1e-07 58.9 88 43.2
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 2.1e-07 58.9 37 64.9
DCAR_028810 Daucus carota HOM05D006892 ORTHO05D008592 2.7e-07 58.5 40 57.5
HPP92_019858 Vanilla planifolia HOM05D006892 ORTHO05D008592 3.6e-07 58.2 37 62.2
Phvul.008G114100 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 6.1e-07 57.4 68 38.2
ClCG04G007580 Citrullus lanatus HOM05D006892 ORTHO05D008592 1.0e-06 56.6 41 56.1
CDE02G2266 Ceratophyllum demersum HOM05D006892 ORTHO05D008592 1.8e-06 55.8 73 41.1
TPR.G33720 Trifolium pratense HOM05D006892 ORTHO05D008592 1.8e-06 55.8 79 39.2
CAN.G697.1 Capsicum annuum HOM05D006892 ORTHO05D008592 2.3e-06 55.5 68 39.7
Rhsim05G0199800 Rhododendron simsii HOM05D006892 ORTHO05D008592 4.0e-06 54.7 36 61.1
Sed0015200 Sechium edule HOM05D006892 ORTHO05D008592 4.0e-06 54.7 36 58.3
GSVIVG01034067001 Vitis vinifera HOM05D006892 ORTHO05D008592 4.0e-06 54.7 55 40.0
HanXRQChr08g0221291 Helianthus annuus HOM05D006892 ORTHO05D008592 6.8e-06 53.9 82 34.1


User provided reference genes

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