Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 2.7e-172 608.6 309 100.0
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 4.0e-144 515.0 318 83.0
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 1.7e-134 483.0 430 62.6
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 6.2e-129 464.5 308 75.6
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.8e-128 463.0 307 75.9
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.2e-127 460.3 307 74.3
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.5e-127 459.9 271 85.6
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 6.4e-126 454.5 307 73.9
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.4e-125 453.4 307 73.3
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.9e-125 453.0 307 75.2
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 2.4e-125 452.6 307 72.6
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 2.4e-125 452.6 307 72.3
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 7.1e-125 451.1 307 72.6
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 2.1e-124 449.5 307 72.0
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 6.0e-124 448.0 307 73.0
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 3.0e-123 445.7 309 72.2
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 1.5e-122 443.4 307 70.7
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 3.3e-122 442.2 307 73.0
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.3e-122 442.2 307 73.0
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 7.3e-122 441.0 307 72.6
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-120 437.2 307 72.3
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.5e-119 433.3 307 71.7
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.6e-119 432.6 307 69.1
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 3.4e-119 432.2 307 68.4
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.6e-119 431.0 308 69.2
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.3e-118 430.3 309 68.9
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.3e-118 430.3 308 69.2
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.3e-118 430.3 307 68.7
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.7e-118 429.9 308 69.2
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 4.9e-118 428.3 307 69.7
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-117 426.4 307 70.7
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 7.9e-116 421.0 308 68.2
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 3.9e-115 418.7 307 66.4
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 5.1e-115 418.3 308 68.8
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 5.1e-115 418.3 308 68.8
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.9e-114 416.4 309 68.6
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 3.6e-113 412.1 309 67.0
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 6.2e-113 411.4 309 66.7
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 8.1e-113 411.0 309 67.3
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 8.1e-113 411.0 307 66.1
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 6.9e-112 407.9 309 66.7
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.7e-110 403.3 307 65.1
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 2.2e-110 402.9 309 65.7
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 2.9e-110 402.5 353 60.6
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 2.4e-109 399.4 307 65.1
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 7.1e-109 397.9 352 61.6
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 7.1e-109 397.9 307 63.8
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 9.3e-109 397.5 307 64.2
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.2e-108 397.1 307 62.2
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.0e-108 394.8 307 64.2
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.3e-107 392.9 307 61.9
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 6.7e-107 391.3 307 60.6
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.5e-106 390.2 307 62.5
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.9e-106 389.8 309 64.4
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 5.6e-106 388.3 306 61.8
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 3.7e-105 385.6 307 62.5
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 1.1e-104 384.0 308 61.7
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 2.4e-104 382.9 311 60.1
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 4.0e-104 382.1 307 61.2
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 3.4e-103 379.0 308 61.0
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 3.4e-103 379.0 307 60.3
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 2.2e-102 376.3 305 62.0
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 4.2e-101 372.1 307 59.0
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.6e-100 370.2 306 60.1
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 3.5e-100 369.0 309 59.5
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 3.0e-99 365.9 292 62.7
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 2.1e-97 359.8 358 54.2
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 1.8e-96 356.7 308 57.8
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 3.8e-94 349.0 292 58.2
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.1e-93 347.4 308 59.7
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 9.3e-93 344.4 308 55.8
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 9.3e-93 344.4 308 55.8
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 2.1e-92 343.2 314 55.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 4.6e-92 342.0 308 55.5
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 7.9e-92 341.3 309 56.3
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 1.0e-91 340.9 303 57.4
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 1.1e-90 337.4 308 55.2
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 7.4e-90 334.7 296 59.5
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 9.7e-90 334.3 237 70.5
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 1.3e-86 323.9 308 51.9
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.3e-86 323.9 308 51.3
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.3e-86 323.9 308 50.6
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 1.7e-86 323.6 241 71.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 2.9e-86 322.8 308 52.6
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 8.5e-86 321.2 293 54.9
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 1.1e-85 320.9 237 65.4
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 1.0e-83 314.3 291 54.6
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 5.1e-83 312.0 308 51.9
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 8.8e-83 311.2 250 63.6
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.8e-81 305.4 266 59.8
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.1e-80 304.3 266 59.4
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 2.4e-80 303.1 311 52.1
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 9.4e-77 291.2 327 49.8
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 4.7e-76 288.9 222 64.0
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.8e-72 276.9 238 57.6
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 4.1e-72 275.8 219 64.4
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 3.5e-71 272.7 181 75.1
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.1e-69 267.7 292 46.2
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 2.5e-69 266.5 302 47.4
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.7e-68 263.1 228 60.1
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 8.0e-60 235.0 242 50.0
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.2e-55 221.1 242 51.7
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 5.0e-46 189.1 293 35.8
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.8e-43 180.6 114 74.6
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.3e-33 147.9 275 28.7
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.3e-29 132.1 113 58.4
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.4e-26 122.9 67 82.1
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.7e-25 120.9 67 80.6
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 1.1e-24 118.2 65 76.9
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.9e-24 117.5 67 74.6
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 7.1e-24 115.5 64 79.7
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 8.1e-12 75.5 65 60.0


User provided reference genes

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