Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 1.1e-93 346.7 180 100.0
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.3e-67 260.0 174 76.4
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 1.1e-66 256.9 174 75.9
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.9e-66 256.1 179 77.7
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.7e-65 251.9 164 77.4
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 4.8e-65 251.5 168 76.2
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 1.1e-64 250.4 173 78.0
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 1.8e-64 249.6 174 73.6
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 2.0e-63 246.1 167 74.3
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 2.6e-63 245.7 176 75.6
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 4.5e-63 245.0 163 76.1
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 5.9e-63 244.6 163 74.2
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 5.9e-63 244.6 173 76.3
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 1.0e-62 243.8 167 75.4
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 3.8e-62 241.9 164 76.2
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 5.0e-62 241.5 164 73.8
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 6.5e-62 241.1 166 72.3
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 3.2e-61 238.8 167 71.3
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 7.2e-61 237.7 158 74.7
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.6e-60 236.5 163 71.8
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 3.6e-60 235.3 177 71.2
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 3.6e-60 235.3 177 71.2
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 4.6e-60 235.0 175 71.4
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 6.1e-60 234.6 171 69.0
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 7.9e-60 234.2 172 68.6
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.0e-59 233.8 158 73.4
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.0e-59 233.8 173 68.8
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 1.0e-59 233.8 173 68.8
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.4e-59 233.4 177 70.6
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.4e-59 233.4 177 70.6
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.8e-59 233.0 167 69.5
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 2.3e-59 232.6 173 71.1
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 3.0e-59 232.3 164 72.0
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 3.9e-59 231.9 168 71.4
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 3.9e-59 231.9 165 72.1
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 5.1e-59 231.5 162 70.4
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 6.7e-59 231.1 178 66.9
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.5e-58 229.9 158 70.9
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.5e-58 229.9 170 71.2
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 3.3e-58 228.8 174 69.0
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.4e-58 228.4 179 67.0
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 5.7e-58 228.0 159 73.0
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 5.7e-58 228.0 169 67.5
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 5.7e-58 228.0 163 72.4
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 7.4e-58 227.6 169 69.2
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 7.4e-58 227.6 159 71.1
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 9.7e-58 227.3 164 70.1
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 1.7e-57 226.5 162 69.1
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 2.2e-57 226.1 162 69.1
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.2e-57 226.1 161 68.9
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 2.2e-57 226.1 161 68.9
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.2e-57 226.1 172 66.9
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 3.7e-57 225.3 167 67.1
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 3.7e-57 225.3 169 66.9
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 3.7e-57 225.3 172 69.2
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.1e-56 223.8 168 69.0
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.4e-56 223.4 160 71.9
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 1.4e-56 223.4 161 69.6
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 1.8e-56 223.0 161 70.2
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 1.8e-56 223.0 167 66.5
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.4e-56 222.6 170 68.8
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 2.4e-56 222.6 155 71.6
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 2.4e-56 222.6 172 68.6
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 3.1e-56 222.2 168 67.3
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 3.1e-56 222.2 161 68.9
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 5.3e-56 221.5 163 68.7
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 5.3e-56 221.5 169 66.9
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 6.9e-56 221.1 162 67.9
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 9.1e-56 220.7 161 68.3
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 9.1e-56 220.7 169 66.3
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 1.2e-55 220.3 169 65.1
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 2.0e-55 219.5 155 71.6
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 2.0e-55 219.5 155 71.6
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 2.0e-55 219.5 160 68.1
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 2.6e-55 219.2 173 64.7
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 4.5e-55 218.4 166 66.3
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 7.7e-55 217.6 161 67.7
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.3e-54 216.9 155 71.0
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.7e-54 216.5 168 66.7
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.7e-54 216.5 168 66.7
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 2.2e-54 216.1 168 66.7
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 2.2e-54 216.1 162 66.0
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 2.2e-54 216.1 162 68.5
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 2.2e-54 216.1 155 71.6
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 2.9e-54 215.7 227 54.2
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 1.4e-53 213.4 160 66.2
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 4.7e-52 208.4 160 63.8
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.4e-51 206.8 164 65.2
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 1.4e-51 206.8 160 66.2
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 2.3e-51 206.1 203 56.7
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 2.3e-51 206.1 142 74.6
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 3.9e-51 205.3 142 73.2
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 5.2e-51 204.9 157 66.2
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 6.7e-51 204.5 140 73.6
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 1.3e-49 200.3 141 73.8
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 8.2e-49 197.6 175 57.1
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 9.1e-48 194.1 169 62.1
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 5.9e-47 191.4 131 74.0
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 6.5e-46 188.0 138 68.8
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 8.5e-46 187.6 152 65.8
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.5e-45 186.8 141 68.8
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.5e-45 186.8 137 69.3
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 7.2e-45 184.5 139 65.5
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.8e-43 179.9 110 80.0
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 1.8e-43 179.9 143 67.1
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 3.0e-43 179.1 158 54.4
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 4.4e-42 175.3 149 57.0
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 2.2e-41 172.9 173 56.1
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 1.6e-39 166.8 143 62.2
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 5.9e-39 164.9 144 63.2
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.4e-35 153.7 104 76.0
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 1.8e-35 153.3 107 72.9
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 5.2e-35 151.8 89 82.0
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 9.1e-32 141.0 78 85.9
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-29 133.7 110 64.5
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-26 123.6 115 60.9
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 5.7e-26 121.7 145 44.8
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.7e-25 120.2 126 57.9
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 3.7e-25 119.0 138 46.4
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 4.9e-25 118.6 66 81.8
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 5.4e-24 115.2 113 55.8
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.2e-23 114.0 76 71.1
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 4.7e-20 102.1 55 85.5
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 8.9e-19 97.8 84 61.9
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.6e-18 96.3 54 85.2
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 2.2e-17 93.2 53 83.0
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 5.9e-15 85.1 58 70.7
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 7.8e-15 84.7 71 62.0
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 7.8e-15 84.7 71 62.0
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.1e-13 80.9 49 81.6
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 5.8e-10 68.6 89 30.3


User provided reference genes

Program Settings