Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 7.7e-101 370.5 196 100.0
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 3.5e-77 292.0 193 82.4
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 6.8e-73 277.7 190 78.9
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 1.1e-57 227.3 204 64.2
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 1.8e-57 226.5 197 63.5
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.4e-57 226.1 189 65.1
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 3.1e-57 225.7 192 64.1
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 9.9e-56 220.7 192 64.1
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.7e-55 219.9 198 59.6
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 2.2e-55 219.5 188 66.0
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 6.4e-55 218.0 192 65.6
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 6.4e-55 218.0 192 63.0
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 8.4e-55 217.6 198 63.1
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 8.4e-55 217.6 192 63.5
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.4e-54 216.1 195 64.1
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.4e-54 216.1 195 64.1
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 9.2e-54 214.2 189 63.0
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.5e-53 212.2 189 62.4
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 6.0e-53 211.5 193 64.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.0e-52 210.7 196 60.7
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.7e-52 209.9 186 65.6
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.3e-52 209.5 189 63.5
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 1.5e-51 206.8 191 61.3
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.9e-51 206.5 191 61.8
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 4.3e-51 205.3 196 59.7
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 5.6e-51 204.9 192 59.9
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 5.6e-51 204.9 191 61.8
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.2e-50 203.8 195 60.5
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.6e-50 203.4 194 56.7
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 6.2e-50 201.4 195 60.0
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 8.1e-50 201.1 194 60.3
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 4.0e-49 198.7 199 63.3
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 6.9e-49 198.0 179 60.9
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.2e-48 197.2 184 63.6
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.2e-48 197.2 192 58.9
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 1.5e-48 196.8 190 60.0
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 2.0e-48 196.4 191 58.1
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 2.6e-48 196.1 196 58.2
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.4e-48 195.7 192 60.4
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 4.4e-48 195.3 203 58.6
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 5.8e-48 194.9 189 62.4
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 5.8e-48 194.9 186 61.8
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 5.8e-48 194.9 201 59.2
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.2e-47 193.0 200 61.0
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 3.8e-47 192.2 188 59.6
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 3.8e-47 192.2 185 60.0
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 3.8e-47 192.2 185 58.9
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 6.4e-47 191.4 175 58.9
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 1.1e-46 190.7 197 59.9
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.4e-46 190.3 182 61.5
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 1.9e-46 189.9 185 56.8
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 3.2e-46 189.1 182 57.7
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 5.4e-46 188.3 144 66.7
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.1e-45 186.4 197 60.4
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 2.7e-45 186.0 183 56.3
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 2.7e-45 186.0 183 55.7
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 2.7e-45 186.0 183 55.7
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.5e-45 185.7 205 57.6
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 4.6e-45 185.3 193 58.0
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 6.0e-45 184.9 181 56.9
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.3e-44 183.7 181 58.6
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 1.7e-44 183.3 183 56.3
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 3.9e-44 182.2 184 59.8
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 3.9e-44 182.2 197 59.9
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.6e-44 181.4 153 64.1
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.6e-44 181.4 179 59.2
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 8.7e-44 181.0 201 58.2
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 1.1e-43 180.6 126 73.8
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.9e-43 179.9 162 59.9
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 4.3e-43 178.7 158 63.3
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 4.3e-43 178.7 174 56.9
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 5.6e-43 178.3 192 57.3
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.1e-42 176.4 129 69.8
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.6e-42 175.6 165 57.0
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 5.3e-41 171.8 191 53.9
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 5.3e-41 171.8 191 53.9
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 5.3e-41 171.8 197 57.9
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.5e-40 170.2 136 71.3
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 2.0e-40 169.9 129 67.4
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.3e-39 167.2 196 54.6
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.3e-39 167.2 138 58.7
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 3.8e-39 165.6 192 52.6
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 8.4e-39 164.5 115 72.2
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 8.4e-39 164.5 202 54.0
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.1e-38 164.1 191 51.3
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.4e-38 163.7 170 57.6
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 7.9e-37 157.9 117 73.5
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 3.9e-36 155.6 176 50.6
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 8.7e-36 154.5 150 56.7
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.1e-35 154.1 96 76.0
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 4.3e-35 152.1 158 51.3
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 5.6e-35 151.8 93 78.5
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.8e-34 149.4 150 58.0
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 3.1e-33 146.0 203 51.2
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 1.2e-32 144.1 135 53.3
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 8.4e-31 137.9 144 52.8
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.4e-30 137.1 89 73.0
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.2e-29 134.0 135 51.1
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 2.3e-28 129.8 145 57.9
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.1e-26 123.2 129 50.4
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.8e-26 122.9 156 50.0
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 9.0e-25 117.9 182 40.1
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 3.2e-22 109.4 189 39.7
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 2.8e-18 96.3 138 51.4
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 3.1e-17 92.8 73 58.9
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 8.5e-15 84.7 106 43.4
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.4e-14 84.0 106 44.3


User provided reference genes

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