Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 7.2e-161 570.5 278 100.0
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 3.8e-138 495.0 277 86.3
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 1.6e-131 473.0 277 80.9
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 2.3e-130 469.2 298 76.5
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 6.8e-127 457.6 278 78.1
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 1.9e-116 422.9 279 72.4
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 3.9e-114 415.2 279 69.9
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 3.9e-114 415.2 278 70.9
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.1e-114 414.8 261 72.0
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 6.6e-114 414.5 278 71.2
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.1e-113 413.7 279 71.0
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.5e-113 413.3 279 70.3
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.5e-113 413.3 278 69.1
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 3.3e-113 412.1 278 69.1
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 9.5e-113 410.6 281 69.8
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.6e-112 409.8 278 69.8
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 2.1e-112 409.5 278 69.8
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.8e-112 409.1 277 67.9
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 2.8e-112 409.1 278 69.8
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 4.7e-112 408.3 277 70.8
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.4e-111 406.8 279 69.2
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.4e-111 406.8 285 68.1
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.8e-111 406.4 283 70.3
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.4e-111 406.0 279 69.5
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 6.8e-111 404.4 272 70.2
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 6.8e-111 404.4 279 70.3
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.0e-110 402.9 279 68.8
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 2.6e-110 402.5 279 69.2
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 2.6e-110 402.5 277 69.0
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 5.8e-110 401.4 279 69.5
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.3e-109 400.2 278 67.6
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.3e-109 400.2 276 69.2
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.3e-109 400.2 261 71.6
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.4e-108 396.7 278 67.6
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 1.4e-108 396.7 271 67.9
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 1.9e-108 396.4 275 68.4
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 2.4e-108 396.0 276 69.2
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 3.2e-108 395.6 244 73.8
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 3.2e-108 395.6 279 68.1
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 5.4e-108 394.8 278 68.7
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.2e-107 393.7 259 71.0
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.2e-107 393.7 277 69.0
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.2e-107 393.7 278 67.3
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 1.2e-107 393.7 280 68.6
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.1e-107 392.9 276 68.1
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 4.6e-107 391.7 230 77.8
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 4.6e-107 391.7 276 67.4
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 1.7e-106 389.8 252 70.2
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 3.0e-106 389.0 278 68.0
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 3.0e-106 389.0 271 66.8
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 3.9e-106 388.7 271 67.2
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 6.6e-106 387.9 279 66.3
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 8.7e-106 387.5 282 67.7
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.5e-105 386.7 279 67.0
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 2.5e-105 386.0 280 67.1
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 3.3e-105 385.6 279 66.7
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 9.6e-105 384.0 239 74.5
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 3.1e-103 379.0 278 64.7
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.3e-103 378.3 276 64.9
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 2.0e-102 376.3 275 65.8
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.3e-101 373.6 278 65.8
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.9e-101 371.7 291 62.9
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.4e-100 370.2 280 64.6
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.9e-100 369.8 279 63.4
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 5.4e-100 368.2 277 63.2
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 7.1e-100 367.9 276 64.5
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 6.0e-99 364.8 280 63.6
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 2.3e-98 362.8 274 63.5
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 2.3e-98 362.8 278 62.2
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 2.3e-98 362.8 279 64.5
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 3.0e-98 362.5 258 65.9
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 2.5e-97 359.4 277 63.5
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 5.6e-97 358.2 253 66.8
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 5.6e-97 358.2 253 66.8
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 7.3e-97 357.8 256 67.6
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 9.6e-97 357.5 235 69.8
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.3e-96 357.1 277 63.5
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 2.1e-96 356.3 253 66.8
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 2.1e-96 356.3 259 66.0
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 1.1e-95 354.0 256 67.6
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.1e-95 354.0 277 62.8
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 1.1e-95 354.0 273 62.3
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.8e-95 353.2 245 64.9
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.8e-95 353.2 253 66.0
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.8e-95 353.2 277 62.5
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 3.1e-95 352.4 249 67.5
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 5.3e-95 351.7 277 63.2
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.3e-95 351.7 260 65.4
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 6.9e-95 351.3 200 78.0
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 9.0e-95 350.9 236 69.1
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.2e-94 350.5 235 68.9
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.7e-93 346.7 279 62.0
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.2e-93 346.3 259 65.3
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 8.4e-93 344.4 199 76.4
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.1e-92 344.0 282 60.3
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.1e-92 344.0 249 65.5
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.9e-92 343.2 259 63.3
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 9.3e-92 340.9 249 65.5
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.6e-91 340.1 305 55.1
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.0e-90 337.4 194 76.3
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 1.6e-80 303.5 212 64.6
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 1.1e-79 300.8 203 67.0
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 4.0e-79 298.9 241 59.8
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.0e-77 294.3 209 69.4
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.0e-77 294.3 227 60.8
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 9.3e-76 287.7 207 66.7
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.9e-74 282.3 246 54.5
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.9e-73 280.0 233 54.9
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.6e-70 269.6 247 50.6
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 7.7e-70 268.1 208 63.5
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 5.0e-69 265.4 264 48.9
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 7.4e-65 251.5 204 55.9
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 3.7e-64 249.2 201 56.2
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 3.0e-58 229.6 260 50.4
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.1e-57 227.6 140 71.4
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 9.1e-55 218.0 151 74.2
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 2.6e-54 216.5 277 44.4
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 7.7e-54 214.9 173 59.0
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.2e-52 209.5 239 45.6
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 8.0e-51 204.9 175 58.3
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 4.2e-44 182.6 170 56.5
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.9e-28 130.6 80 73.8
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 9.5e-28 128.3 148 47.3
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.3e-13 81.3 56 62.5
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.8e-10 70.9 123 39.0


User provided reference genes

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