Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G233600 Carya illinoinensis HOM05D006052 ORTHO05D007319 9.9e-52 206.5 101 100.0
Haze_16332 Corylus avellana HOM05D006052 ORTHO05D007319 1.4e-42 176.0 98 85.7
CANSAT56G3932 Cannabis sativa HOM05D006052 ORTHO05D007319 5.5e-42 174.1 101 83.2
Manes.04G131832 Manihot esculenta HOM05D006052 ORTHO05D007319 2.1e-41 172.2 98 82.7
Potri.001G187200 Populus trichocarpa HOM05D006052 ORTHO05D007319 2.7e-41 171.8 98 84.7
Eucgr.F03060 Eucalyptus grandis HOM05D006052 ORTHO05D007319 7.9e-41 170.2 96 85.4
Dinv37999 Davidia involucrata HOM05D006052 ORTHO05D007319 1.3e-40 169.5 98 81.6
MD17G1187600 Malus domestica HOM05D006052 ORTHO05D007319 1.3e-40 169.5 98 83.7
CSS0026597 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 3.9e-40 167.9 98 81.6
Prupe.3G063000 Prunus persica HOM05D006052 ORTHO05D007319 3.9e-40 167.9 98 82.7
PGR102G0387 Punica granatum HOM05D006052 ORTHO05D007319 3.9e-40 167.9 99 83.8
Thecc.06G096200 Theobroma cacao HOM05D006052 ORTHO05D007319 4.3e-39 164.5 98 76.5
PGSC0003DMG402002538 Solanum tuberosum HOM05D006052 ORTHO05D007319 7.4e-39 163.7 99 77.8
Actinidia39148 Actinidia chinensis HOM05D006052 ORTHO05D007319 1.6e-38 162.5 98 78.6
Solyc03g120820.4 Solanum lycopersicum HOM05D006052 ORTHO05D007319 1.6e-38 162.5 99 76.8
Eucgr.E01716 Eucalyptus grandis HOM05D006052 ORTHO05D007319 2.1e-38 162.2 97 78.4
Solyc12g044380.3 Solanum lycopersicum HOM05D006052 ORTHO05D007319 2.1e-38 162.2 94 81.9
Sopen12g022650 Solanum pennellii HOM05D006052 ORTHO05D007319 2.1e-38 162.2 94 81.9
PGSC0003DMG400026453 Solanum tuberosum HOM05D006052 ORTHO05D007319 2.1e-38 162.2 94 81.9
Dinv32171 Davidia involucrata HOM05D006052 ORTHO05D007319 2.8e-38 161.8 98 79.6
CSS0014721 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 3.7e-38 161.4 90 84.4
FAN14G5158 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.7e-38 161.4 96 81.2
Nitab4.5_0003039g0060 Nicotiana tabacum HOM05D006052 ORTHO05D007319 3.7e-38 161.4 90 84.4
Peaxi162Scf00038g00824 Petunia axillaris HOM05D006052 ORTHO05D007319 4.8e-38 161.0 95 78.9
CAN.G203.53 Capsicum annuum HOM05D006052 ORTHO05D007319 6.3e-38 160.6 92 82.6
Glyma.07G017500 Glycine max HOM05D006052 ORTHO05D007319 6.3e-38 160.6 98 76.5
Nitab4.5_0007758g0100 Nicotiana tabacum HOM05D006052 ORTHO05D007319 8.2e-38 160.2 94 80.9
ClCG09G001790 Citrullus lanatus HOM05D006052 ORTHO05D007319 1.1e-37 159.8 94 79.8
Sc15g0001990 Simmondsia chinensis HOM05D006052 ORTHO05D007319 1.1e-37 159.8 97 79.4
vmacro16981 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 1.1e-37 159.8 95 78.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.8e-37 159.1 96 80.2
CsaV3_7G033550 Cucumis sativus L. HOM05D006052 ORTHO05D007319 2.4e-37 158.7 94 78.7
Phvul.010G146800 Phaseolus vulgaris HOM05D006052 ORTHO05D007319 3.1e-37 158.3 98 74.5
Gohir.A05G128200 Gossypium hirsutum HOM05D006052 ORTHO05D007319 4.1e-37 157.9 96 78.1
MBI04_g27065_MAGBIO Magnolia biondii HOM05D006052 ORTHO05D007319 4.1e-37 157.9 90 81.1
arahy.Tifrunner.gnm1.ann1.69I5GX Arachis hypogaea HOM05D006052 ORTHO05D007319 6.9e-37 157.1 98 76.5
arahy.Tifrunner.gnm1.ann1.NZ5FDW Arachis hypogaea HOM05D006052 ORTHO05D007319 6.9e-37 157.1 98 76.5
arahy.Tifrunner.gnm1.ann1.S0BGA2 Arachis hypogaea HOM05D006052 ORTHO05D007319 6.9e-37 157.1 98 76.5
MSTRG.22652 Avicennia marina HOM05D006052 ORTHO05D007319 6.9e-37 157.1 84 86.9
FAN02G3299 Fragaria x ananassa HOM05D006052 ORTHO05D007319 6.9e-37 157.1 98 78.6
RcHm_v2.0_Chr2g0139621 Rosa chinensis HOM05D006052 ORTHO05D007319 6.9e-37 157.1 98 77.6
Nn3g18169 Nelumbo nucifera HOM05D006052 ORTHO05D007319 1.2e-36 156.4 91 79.1
Migut.I00924 Erythranthe guttata HOM05D006052 ORTHO05D007319 1.5e-36 156.0 98 76.5
Gohir.D05G132700 Gossypium hirsutum HOM05D006052 ORTHO05D007319 1.5e-36 156.0 96 77.1
Gorai.009G136400 Gossypium raimondii HOM05D006052 ORTHO05D007319 1.5e-36 156.0 96 77.1
Lalb_Chr01g0013101 Lupinus albus HOM05D006052 ORTHO05D007319 1.5e-36 156.0 97 75.3
Lalb_Chr01g0013121 Lupinus albus HOM05D006052 ORTHO05D007319 1.5e-36 156.0 97 75.3
TAR626G0898 Trochodendron aralioides HOM05D006052 ORTHO05D007319 1.5e-36 156.0 99 76.8
TAR636G2101 Trochodendron aralioides HOM05D006052 ORTHO05D007319 1.5e-36 156.0 99 76.8
Ciclev10026826m.g Citrus clementina HOM05D006052 ORTHO05D007319 2.0e-36 155.6 98 77.6
Glyma.08G202700 Glycine max HOM05D006052 ORTHO05D007319 2.0e-36 155.6 98 74.5
TWI12G0943 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 2.6e-36 155.2 98 74.5
Cc04_g02780 Coffea canephora HOM05D006052 ORTHO05D007319 3.4e-36 154.8 86 83.7
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 5.9e-36 154.1 96 76.0
TWI18G1030 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 5.9e-36 154.1 97 75.3
PSO566G0324 Papaver somniferum HOM05D006052 ORTHO05D007319 7.6e-36 153.7 99 73.7
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 7.6e-36 153.7 98 73.5
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.0e-35 153.3 94 76.6
Rhsim12G0201800 Rhododendron simsii HOM05D006052 ORTHO05D007319 1.7e-35 152.5 117 65.8
TPR.G14815 Trifolium pratense HOM05D006052 ORTHO05D007319 1.7e-35 152.5 96 75.0
HanXRQChr02g0032361 Helianthus annuus HOM05D006052 ORTHO05D007319 2.2e-35 152.1 98 75.5
Medtr8g013760 Medicago truncatula HOM05D006052 ORTHO05D007319 2.2e-35 152.1 99 73.7
Sed0023726 Sechium edule HOM05D006052 ORTHO05D007319 2.9e-35 151.8 94 75.5
unitig_748.g8097 Utricularia gibba HOM05D003052 ORTHO05D007319 5.0e-35 151.0 82 85.4
VMungo1309G2952 Vigna mungo HOM05D006052 ORTHO05D007319 5.0e-35 151.0 95 72.6
DCAR_026339 Daucus carota HOM05D006052 ORTHO05D007319 6.5e-35 150.6 93 76.3
Hma1.2p1_1689F.1_g297700 Hydrangea macrophylla HOM05D006052 ORTHO05D007319 6.5e-35 150.6 81 86.4
SGA_v2.0_scaffold69G23334 Striga asiatica HOM05D006052 ORTHO05D007319 6.5e-35 150.6 93 78.5
Medtr3g112340 Medicago truncatula HOM05D006052 ORTHO05D007319 8.4e-35 150.2 99 72.7
PSO782G5494 Papaver somniferum HOM05D006052 ORTHO05D007319 8.4e-35 150.2 99 71.7
Zm00001eb002070 Zea mays HOM05D006052 ORTHO05D007319 1.9e-34 149.1 94 77.7
QL05p021035 Quercus lobata HOM05D006052 ORTHO05D007319 2.5e-34 148.7 119 63.0
HanXRQChr16g0501261 Helianthus annuus HOM05D006052 ORTHO05D007319 3.2e-34 148.3 101 73.3
Zm00001eb295530 Zea mays HOM05D006052 ORTHO05D007319 3.2e-34 148.3 94 76.6
Thhalv10019223m.g Eutrema salsugineum HOM05D006052 ORTHO05D007319 7.2e-34 147.1 96 70.8
EL10Ac9g22109 Beta vulgaris HOM05D006052 ORTHO05D007319 1.2e-33 146.4 95 72.6
ECA232G3158 Erigeron canadensis HOM05D006052 ORTHO05D007319 1.2e-33 146.4 90 76.7
Sp5g24870 Schrenkiella parvula HOM05D006052 ORTHO05D007319 1.2e-33 146.4 98 68.4
HPP92_024167 Vanilla planifolia HOM05D006052 ORTHO05D007319 2.7e-33 145.2 93 76.3
AUR62031876 Chenopodium quinoa HOM05D006052 ORTHO05D007319 4.6e-33 144.4 88 76.1
AT1G66590 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 6.1e-33 144.1 98 67.3
AT1G69750 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 6.1e-33 144.1 98 67.3
AL2G28930 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 7.9e-33 143.7 97 68.0
BcaB03g14752 Brassica carinata HOM05D006052 ORTHO05D007319 1.0e-32 143.3 98 68.4
C06p43560 Brassica napus HOM05D006052 ORTHO05D007319 1.0e-32 143.3 96 68.8
BolC6t39428H Brassica oleracea HOM05D006052 ORTHO05D007319 1.0e-32 143.3 96 68.8
Carub.0002s1643 Capsella rubella HOM05D006052 ORTHO05D007319 1.0e-32 143.3 98 66.3
CDE02G2125 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 1.0e-32 143.3 88 76.1
CDE08G0656 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 1.3e-32 142.9 88 76.1
AUR62022170 Chenopodium quinoa HOM05D006052 ORTHO05D007319 1.8e-32 142.5 88 75.0
Lj3g0026702 Lotus japonicus HOM05D006052 ORTHO05D007319 1.8e-32 142.5 89 74.2
BcaB03g15501 Brassica carinata HOM05D006052 ORTHO05D007319 2.3e-32 142.1 94 69.1
A07p36160 Brassica napus HOM05D006052 ORTHO05D007319 2.3e-32 142.1 96 67.7
BraA07t31192Z Brassica rapa HOM05D006052 ORTHO05D007319 2.3e-32 142.1 96 67.7
GSVIVG01017036001 Vitis vinifera HOM05D006052 ORTHO05D007319 3.9e-32 141.4 98 69.4
AL1G38650 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 5.1e-32 141.0 79 81.0
THA.LOC104800715 Tarenaya hassleriana HOM05D006052 ORTHO05D007319 2.5e-31 138.7 89 73.0
CARHR062820 Cardamine hirsuta HOM05D006052 ORTHO05D007319 3.3e-31 138.3 93 67.7
BcaC03g15114 Brassica carinata HOM05D006052 ORTHO05D007319 1.4e-29 132.9 85 72.9
BolC2t08748H Brassica oleracea HOM05D006052 ORTHO05D007319 1.4e-29 132.9 85 72.9
Aa31LG7G8230 Aethionema arabicum HOM05D006052 ORTHO05D007319 5.3e-29 131.0 76 77.6
BraA07t30774Z Brassica rapa HOM05D006052 ORTHO05D007319 2.0e-28 129.0 86 69.8
A07p31390 Brassica napus HOM05D006052 ORTHO05D007319 3.4e-28 128.3 84 70.2
QL05p020889 Quercus lobata HOM05D006052 ORTHO05D007319 3.4e-28 128.3 68 85.3
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 1.7e-27 125.9 66 83.3
Mapoly0075s0024 Marchantia polymorpha HOM05D006052 ORTHO05D007319 3.8e-27 124.8 83 72.3
SalBow6G3458 Salvia bowleyana HOM05D006052 ORTHO05D007319 6.5e-27 124.0 66 81.8
C02p26750 Brassica napus HOM05D006052 ORTHO05D007319 8.5e-27 123.6 92 64.1
Psat4g197560 Pisum sativum HOM05D006052 ORTHO05D007319 1.1e-26 123.2 66 83.3
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 3.2e-26 121.7 65 83.1
SEGI_14426 Sequoiadendron giganteum HOM05D006052 ORTHO05D007319 7.2e-26 120.6 72 77.8
SMO271G0187 Selaginella moellendorffii HOM05D006052 ORTHO05D007319 1.2e-25 119.8 84 60.7
Nitab4.5_0001315g0290 Nicotiana tabacum HOM05D006052 ORTHO05D007319 6.7e-24 114.0 82 67.1
Pp3c14_6840 Physcomitrium patens HOM05D006052 ORTHO05D007319 3.3e-23 111.7 78 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4288 Anthoceros agrestis HOM05D006052 ORTHO05D007319 9.7e-23 110.2 79 62.0
MD09G1206900 Malus domestica HOM05D006052 ORTHO05D007319 9.7e-23 110.2 91 63.7
RcHm_v2.0_Chr5g0082611 Rosa chinensis HOM05D006052 ORTHO05D007319 1.7e-22 109.4 63 76.2
CBR_g27938 Chara braunii HOM05D006052 ORTHO05D007319 1.1e-21 106.7 101 52.5
Atru.ctg114.13 Acer truncatum HOM05D006052 ORTHO05D007319 3.1e-21 105.1 66 71.2
RcHm_v2.0_Chr5g0082321 Rosa chinensis HOM05D006052 ORTHO05D007319 4.1e-21 104.8 63 74.6
MELO3C024266.2 Cucumis melo HOM05D006052 ORTHO05D007319 6.9e-21 104.0 67 73.1
Nitab4.5_0008606g0020 Nicotiana tabacum HOM05D006052 ORTHO05D007319 6.9e-21 104.0 53 84.9
RcHm_v2.0_Chr4g0404221 Rosa chinensis HOM05D006052 ORTHO05D007319 6.9e-21 104.0 62 75.8
BraA02t06670Z Brassica rapa HOM05D006052 ORTHO05D007319 3.8e-19 98.2 63 68.3
A02p16100 Brassica napus HOM05D006052 ORTHO05D007319 1.1e-18 96.7 64 67.2
Manes.11G036000 Manihot esculenta HOM05D006052 ORTHO05D007319 1.9e-18 95.9 63 71.4
vmacro16174 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 7.9e-17 90.5 58 74.1
Lsat_1_v5_gn_1_34740 Lactuca sativa HOM05D006052 ORTHO05D007319 1.0e-16 90.1 73 61.6
Sp2g00570 Schrenkiella parvula HOM05D006052 ORTHO05D007319 1.3e-14 83.2 65 61.5
Nn2g12137 Nelumbo nucifera HOM05D006052 ORTHO05D007319 8.2e-14 80.5 49 73.5
Cre10.g454550 Chlamydomonas reinhardtii HOM05D006052 ORTHO05D007319 1.4e-13 79.7 73 52.1
MCO15G075 Micromonas commoda HOM05D006052 ORTHO05D007319 7.0e-13 77.4 84 47.6
PRCOL_00001792 Prasinoderma coloniale HOM05D006052 ORTHO05D007319 2.6e-12 75.5 81 45.7
TPR.G20406 Trifolium pratense HOM05D006052 ORTHO05D007319 5.9e-12 74.3 33 93.9
Cfa026674 Carpinus fangiana HOM05D006052 ORTHO05D007319 5.0e-11 71.2 80 50.0
CBR_g29697 Chara braunii HOM05D035488 ORTHO05D007319 5.2e-08 61.2 65 40.0


User provided reference genes

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