Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 6.0e-32 140.2 69 100.0
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.9e-23 110.9 73 78.1
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.1e-23 110.5 68 79.4
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.1e-23 110.5 68 79.4
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 1.7e-18 95.5 72 66.7
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.9e-18 94.7 57 82.5
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 3.8e-18 94.4 72 66.7
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 6.4e-18 93.6 72 69.4
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 8.4e-18 93.2 71 70.4
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 1.1e-17 92.8 72 69.4
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 6.6e-15 83.6 73 67.1
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 2.5e-14 81.6 76 59.2
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 3.3e-14 81.3 69 55.1
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 3.3e-14 81.3 75 60.0
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 4.3e-14 80.9 72 56.9
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 2.8e-13 78.2 78 53.8
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 3.6e-13 77.8 72 58.3
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 6.2e-13 77.0 72 56.9
Nn8g38999 Nelumbo nucifera HOM05D008383 ORTHO05D010186 6.2e-13 77.0 74 51.4
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 6.2e-13 77.0 76 53.9
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 8.1e-13 76.6 72 56.9
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 8.1e-13 76.6 68 57.4
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 4.0e-12 74.3 69 58.0
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 6.9e-12 73.6 72 56.9
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 9.0e-12 73.2 76 56.6
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 1.2e-11 72.8 71 49.3
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 1.5e-11 72.4 77 54.5
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 2.0e-11 72.0 72 50.0
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 1.3e-10 69.3 74 50.0
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 1.7e-10 68.9 71 50.7
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 1.7e-10 68.9 72 59.7
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 1.7e-10 68.9 76 53.9
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 2.2e-10 68.6 66 53.0
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 6.4e-10 67.0 56 60.7
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 8.4e-10 66.6 77 45.5
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 1.6e-08 62.4 71 45.1
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.1e-08 62.0 78 50.0
GSVIVG01016930001 Vitis vinifera HOM05D008383 ORTHO05D010186 2.7e-08 61.6 55 56.4
GSVIVG01016932001 Vitis vinifera HOM05D008383 ORTHO05D010186 3.5e-08 61.2 50 60.0
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 6.0e-08 60.5 68 42.6
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 1.3e-07 59.3 69 52.2
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 1.8e-07 58.9 73 45.2
Atru.chr1.3568 Acer truncatum HOM05D030296 ORTHO05D026273 2.3e-07 58.5 68 47.1
Cc04_g16700 Coffea canephora HOM05D041849 ORTHO05D011144 3.0e-07 58.2 61 50.8
Gorai.011G069700 Gossypium raimondii HOM05D020625 ORTHO05D022804 3.0e-07 58.2 72 44.4
Ciclev10026890m.g Citrus clementina HOM05D008383 ORTHO05D010186 5.1e-07 57.4 70 47.1
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 6.7e-07 57.0 72 44.4
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 6.7e-07 57.0 78 44.9
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 8.7e-07 56.6 77 39.0
Dinv37958 Davidia involucrata HOM05D027392 ORTHO05D016433 8.7e-07 56.6 74 44.6
COL.COLO4_30544 Corchorus olitorius HOM05D008383 ORTHO05D010186 1.5e-06 55.8 69 42.0
TPR.G37221 Trifolium pratense HOM05D002271 ORTHO05D002346 1.5e-06 55.8 76 43.4
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 1.9e-06 55.5 71 43.7
Manes.11G030700 Manihot esculenta HOM05D008383 ORTHO05D010186 2.5e-06 55.1 76 43.4
Rhsim12G0204100 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.5e-06 55.1 78 41.0
Sabra03G0035500 Salix brachista HOM05D008383 ORTHO05D010186 3.3e-06 54.7 76 48.7
Hma1.2p1_0764F.1_g214990 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 7.4e-06 53.5 76 46.1


User provided reference genes

Program Settings