Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.5e-237 825.1 435 100.0
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.2e-217 758.8 437 92.0
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 2.5e-168 595.9 476 68.9
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 8.4e-140 501.1 401 64.8
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 5.4e-139 498.4 402 63.4
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 9.3e-139 497.7 402 63.4
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 2.1e-138 496.5 401 64.3
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 1.0e-137 494.2 399 61.7
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 1.8e-137 493.4 396 63.9
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 6.9e-134 481.5 651 47.8
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 1.0e-132 477.6 399 59.9
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 3.8e-132 475.7 399 60.4
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 1.9e-131 473.4 425 59.5
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 2.5e-131 473.0 421 59.4
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 2.1e-130 469.9 414 59.9
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 2.1e-130 469.9 401 60.1
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 1.3e-129 467.2 403 61.8
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 7.4e-128 461.5 399 61.7
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.6e-127 460.3 405 58.3
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 6.2e-127 458.4 396 60.1
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 1.8e-126 456.8 412 58.3
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 3.4e-125 452.6 400 60.0
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 3.8e-124 449.1 401 57.9
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 4.9e-124 448.7 400 59.2
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 6.5e-124 448.4 357 63.0
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 1.1e-123 447.6 443 55.8
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.9e-123 446.8 398 57.3
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 1.9e-123 446.8 419 54.9
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.9e-123 446.8 398 57.5
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 2.5e-123 446.4 392 58.7
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.2e-123 446.0 398 57.5
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 7.1e-123 444.9 398 57.0
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 1.2e-122 444.1 396 59.8
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 1.6e-122 443.7 398 57.0
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 2.1e-122 443.4 398 59.3
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 4.6e-122 442.2 399 55.4
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 4.6e-122 442.2 396 59.3
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 5.1e-121 438.7 399 56.9
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 1.9e-120 436.8 396 57.8
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 7.4e-120 434.9 432 53.0
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 9.7e-120 434.5 394 58.4
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 1.3e-119 434.1 396 58.3
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 1.6e-119 433.7 410 55.6
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 3.7e-119 432.6 409 55.7
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 1.4e-118 430.6 403 54.3
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 9.0e-118 427.9 398 55.3
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 1.2e-117 427.6 397 56.2
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.2e-117 427.6 434 52.5
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 7.7e-117 424.9 377 58.1
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 7.7e-117 424.9 398 55.5
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 1.0e-116 424.5 399 55.1
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 2.5e-115 419.9 399 54.4
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 3.2e-115 419.5 396 56.8
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 4.6e-114 415.6 399 54.1
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 4.6e-114 415.6 395 55.7
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 1.0e-113 414.5 399 53.1
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 1.8e-113 413.7 404 54.5
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 8.8e-113 411.4 390 54.9
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 7.4e-112 408.3 401 52.6
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 2.8e-111 406.4 401 52.4
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 8.2e-111 404.8 407 53.6
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 2.4e-110 403.3 436 51.1
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 4.1e-110 402.5 399 53.9
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.2e-109 401.0 473 48.2
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 3.4e-109 399.4 409 52.6
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 4.5e-109 399.1 402 52.5
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 7.7e-109 398.3 409 52.8
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.3e-108 397.5 409 52.8
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 2.2e-108 396.7 395 54.2
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 1.4e-107 394.0 402 52.0
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 3.2e-107 392.9 396 52.8
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 1.0e-105 387.9 316 62.0
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 1.0e-105 387.9 351 56.7
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 1.4e-105 387.5 399 48.9
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 1.4e-105 387.5 399 52.4
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 2.0e-104 383.6 401 50.1
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 2.2e-103 380.2 399 49.1
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 2.2e-103 380.2 406 49.8
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 8.2e-103 378.3 402 49.5
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 3.1e-102 376.3 405 50.1
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 4.1e-102 375.9 397 50.1
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 5.3e-102 375.6 400 51.0
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 7.7e-101 371.7 402 48.5
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 1.0e-100 371.3 385 52.7
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 2.2e-100 370.2 401 47.9
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 6.5e-100 368.6 401 48.6
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 5.5e-99 365.5 400 49.0
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.6e-98 364.0 399 48.6
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 5.2e-97 359.0 399 48.1
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 6.7e-97 358.6 420 48.3
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 9.7e-96 354.8 404 45.8
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 2.2e-95 353.6 399 46.6
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 6.3e-95 352.1 401 46.9
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 8.2e-95 351.7 399 46.6
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 1.4e-94 350.9 399 47.6
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 1.0e-92 344.7 399 45.6
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 1.0e-92 344.7 399 45.6
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 1.0e-92 344.7 399 45.6
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.3e-92 344.4 402 46.8
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 1.3e-92 344.4 406 45.6
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 1.5e-91 340.9 399 45.1
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 1.9e-91 340.5 399 45.1
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 5.5e-91 339.0 406 44.6
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.6e-90 337.4 396 45.5
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 4.7e-90 335.9 398 46.5
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 1.0e-89 334.7 397 46.6
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 1.8e-86 323.9 316 52.2
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.7e-84 317.4 421 41.8
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 2.5e-83 313.5 405 44.2
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.5e-80 304.3 389 45.0
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 7.5e-80 302.0 396 46.5
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 5.4e-78 295.8 399 42.9
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 8.6e-76 288.5 296 52.4
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 7.2e-75 285.4 423 41.4
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 8.3e-71 271.9 245 56.7
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 8.3e-71 271.9 407 41.8
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 4.0e-65 253.1 288 48.3
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 5.4e-62 242.7 238 53.8
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 2.0e-61 240.7 361 40.2
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 1.0e-60 238.4 216 54.6
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 3.1e-57 226.9 345 45.2
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 8.9e-57 225.3 398 36.9
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 3.2e-54 216.9 400 37.8
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.3e-52 211.5 377 38.5
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 1.6e-50 204.5 309 40.5
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 2.1e-50 204.1 444 31.3
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 2.8e-50 203.8 425 34.1
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 3.4e-48 196.8 278 42.4
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 9.9e-48 195.3 229 46.3
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 2.3e-44 184.1 241 40.2
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 8.6e-44 182.2 236 42.4
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 9.6e-43 178.7 407 35.1
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 2.1e-42 177.6 319 37.3
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 2.0e-40 171.0 408 34.6
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.2e-39 167.5 396 31.8
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 6.6e-36 156.0 138 58.7
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.1e-35 155.2 243 39.1
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 5.4e-30 136.3 334 30.5
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 5.1e-28 129.8 110 56.4
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 9.6e-27 125.6 435 26.2
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 6.2e-26 122.9 157 45.2
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 4.0e-25 120.2 152 46.1
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 1.5e-24 118.2 108 58.3
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 5.8e-24 116.3 144 47.2
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 3.8e-23 113.6 178 39.3
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.9e-22 111.3 140 47.1
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.8e-20 104.8 130 43.1
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 2.5e-19 100.9 132 39.4
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.4e-17 95.1 174 35.6
Psat6g077080 Pisum sativum HOM05D001891 ORTHO05D005832 1.9e-14 84.7 122 40.2
Psat6g077120 Pisum sativum HOM05D001891 ORTHO05D005832 1.9e-14 84.7 122 40.2
PSO017G0055 Papaver somniferum HOM05D004436 ORTHO05D005179 2.5e-11 74.3 123 38.2
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 2.5e-11 74.3 130 33.8
Oeu027301.1 Olea europaea HOM05D004436 ORTHO05D005179 2.8e-10 70.9 139 35.3
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 1.4e-09 68.6 93 41.9
ATR0589G117 Amborella trichopoda HOM05D004436 ORTHO05D005179 6.9e-09 66.2 88 40.9
QL04p029653 Quercus lobata HOM05D004436 ORTHO05D005179 2.0e-08 64.7 51 62.7
TPR.G26235 Trifolium pratense HOM05D001104 ORTHO05D006535 3.4e-08 63.9 134 32.1
FAN14G1374 Fragaria x ananassa HOM05D004436 ORTHO05D005179 7.2e-06 56.2 157 29.9
Ca_02098_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 9.3e-06 55.8 133 32.3


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