Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G218600 Carya illinoinensis HOM05D008345 ORTHO05D010179 8.7e-79 297.0 158 100.0
TWI79G1189 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.4e-12 77.0 62 66.1
Ciclev10026572m.g Citrus clementina HOM05D008345 ORTHO05D010179 5.4e-12 75.1 80 58.8
Prupe.3G041900 Prunus persica HOM05D008345 ORTHO05D010179 9.2e-12 74.3 141 44.0
FvH4_6g34720 Fragaria vesca HOM05D008345 ORTHO05D010179 1.0e-10 70.9 103 46.6
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 1.3e-10 70.5 190 40.5
FAN09G3851 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.3e-10 70.5 83 49.4
FAN14G1116 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.7e-10 70.1 102 46.1
Potri.003G064900 Populus trichocarpa HOM05D008345 ORTHO05D010179 2.3e-10 69.7 44 79.5
QL05p007306 Quercus lobata HOM05D008345 ORTHO05D010179 3.0e-10 69.3 56 64.3
Sabra03G0038200 Salix brachista HOM05D008345 ORTHO05D010179 3.0e-10 69.3 44 79.5
Atru.chr1.3940 Acer truncatum HOM05D008345 ORTHO05D010179 6.6e-10 68.2 74 55.4
COL.COLO4_30757 Corchorus olitorius HOM05D008345 ORTHO05D010179 1.5e-09 67.0 44 75.0
RcHm_v2.0_Chr2g0145371 Rosa chinensis HOM05D008345 ORTHO05D010179 1.9e-09 66.6 44 77.3
Manes.04G144600 Manihot esculenta HOM05D008345 ORTHO05D010179 2.5e-09 66.2 63 54.0
Medtr8g020530 Medicago truncatula HOM05D008345 ORTHO05D010179 4.3e-09 65.5 57 63.2
CANSAT56G1799 Cannabis sativa HOM05D008345 ORTHO05D010179 5.6e-09 65.1 45 75.6
Duzib192G0347 Durio zibethinus HOM05D008345 ORTHO05D010179 5.6e-09 65.1 44 68.2
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 7.3e-09 64.7 48 66.7
Duzib235G0194 Durio zibethinus HOM05D008345 ORTHO05D010179 7.3e-09 64.7 79 48.1
FAN02G4084 Fragaria x ananassa HOM05D008345 ORTHO05D010179 7.3e-09 64.7 42 73.8
FAN05G3870 Fragaria x ananassa HOM05D008345 ORTHO05D010179 7.3e-09 64.7 42 73.8
Nn8g38674 Nelumbo nucifera HOM05D042106 ORTHO05D010179 7.3e-09 64.7 63 47.6
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 9.5e-09 64.3 171 36.3
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 9.5e-09 64.3 48 66.7
Lalb_Chr04g0263511 Lupinus albus HOM05D008345 ORTHO05D010179 9.5e-09 64.3 45 66.7
Thecc.06G120000 Theobroma cacao HOM05D008345 ORTHO05D010179 9.5e-09 64.3 44 70.5
Migut.I01074 Erythranthe guttata HOM05D011544 ORTHO05D010179 1.2e-08 63.9 61 49.2
Glyma.07G038300 Glycine max HOM05D008345 ORTHO05D010179 1.6e-08 63.5 45 71.1
Gohir.A05G140100 Gossypium hirsutum HOM05D008345 ORTHO05D010179 2.1e-08 63.2 58 58.6
Gorai.009G146400 Gossypium raimondii HOM05D008345 ORTHO05D010179 2.1e-08 63.2 44 68.2
Duzib160G0403 Durio zibethinus HOM05D008345 ORTHO05D010179 2.8e-08 62.8 44 68.2
PGR119G1016 Punica granatum HOM05D008345 ORTHO05D010179 3.6e-08 62.4 48 62.5
Cpa.g.sc25.117 Carica papaya HOM05D008345 ORTHO05D010179 4.7e-08 62.0 41 75.6
TWI31G0115 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 6.2e-08 61.6 40 75.0
Lalb_Chr01g0013621 Lupinus albus HOM05D008345 ORTHO05D010179 8.1e-08 61.2 45 64.4
Sabra01G0141900 Salix brachista HOM05D008345 ORTHO05D010179 8.1e-08 61.2 40 75.0
Gohir.D05G142400 Gossypium hirsutum HOM05D008345 ORTHO05D010179 1.1e-07 60.8 58 56.9
Lj3g0003445 Lotus japonicus HOM05D008345 ORTHO05D010179 3.1e-07 59.3 45 66.7
Lj4g0027375 Lotus japonicus HOM05D008345 ORTHO05D010179 3.1e-07 59.3 45 66.7
CiPaw.02G135800 Carya illinoinensis HOM05D008345 ORTHO05D010179 4.0e-07 58.9 179 36.9
Sed0012336 Sechium edule HOM05D008345 ORTHO05D010179 4.0e-07 58.9 48 62.5
EL10Ac7g16409 Beta vulgaris HOM05D008345 ORTHO05D010179 6.8e-07 58.2 37 78.4
Nn6g35611 Nelumbo nucifera HOM05D008345 ORTHO05D010179 6.8e-07 58.2 50 62.0
Aa31LG4G2900 Aethionema arabicum HOM05D013126 ORTHO05D015256 4.4e-06 55.5 46 63.0
TPR.G32503 Trifolium pratense HOM05D008345 ORTHO05D010179 5.8e-06 55.1 47 63.8
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 7.6e-06 54.7 43 60.5
SalBow7G3114 Salvia bowleyana HOM05D011544 ORTHO05D010179 9.9e-06 54.3 71 43.7
Sopen03g041200 Solanum pennellii HOM05D011544 ORTHO05D010179 9.9e-06 54.3 61 50.8


User provided reference genes

Program Settings