Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.0e-54 217.2 182 100.0
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.1e-53 213.8 182 98.9
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.8e-47 191.0 182 79.1
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.6e-31 138.7 181 64.1
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.3e-30 136.3 175 66.9
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.9e-29 133.3 179 64.2
CiPaw.11G026600 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.3e-29 132.1 182 69.2
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-28 130.6 94 72.3
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.6e-28 130.2 175 74.3
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.6e-26 122.9 92 69.6
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.4e-26 122.5 89 64.0
CiPaw.04G185500 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.4e-26 122.1 82 70.7
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-25 120.6 92 68.5
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-25 120.6 92 68.5
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-25 120.2 92 68.5
CiPaw.03G153800 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.0e-23 111.7 182 69.2
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.8e-23 111.3 66 74.2
CiPaw.01G280200 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.5e-21 106.3 90 60.0
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-20 104.0 75 64.0
CiPaw.09G001000 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.6e-15 87.0 82 53.7
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.7e-15 86.3 84 51.2
CiPaw.15G141100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.5e-13 80.5 58 60.3
CiPaw.11G103900 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.6e-12 75.9 82 46.3
TPR.G31023 Trifolium pratense HOM05D019053 ORTHO05D020883 1.9e-08 63.5 58 46.6
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-08 62.4 71 45.1
TPR.G13864 Trifolium pratense HOM05D019053 ORTHO05D020883 5.5e-08 62.0 71 39.4
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-08 61.6 84 44.0
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 9.3e-08 61.2 74 45.9
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 1.2e-07 60.8 45 51.1
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-07 60.5 74 45.9
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-07 60.1 78 43.6
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.1e-07 60.1 45 55.6
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-07 59.7 76 44.7
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-07 59.7 78 43.6
CiPaw.05G170400 Carya illinoinensis HOM05D000059 ORTHO05D000128 3.5e-07 59.3 58 46.6
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-07 58.9 74 43.2
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-07 58.9 78 43.6
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.6e-07 58.9 71 40.8
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-07 58.5 74 43.2
Nitab4.5_0000353g0030 Nicotiana tabacum HOM05D028725 ORTHO05D000309 6.0e-07 58.5 78 42.3
CANSAT54G0644 Cannabis sativa HOM05D015495 ORTHO05D024749 7.9e-07 58.2 73 38.4
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 7.9e-07 58.2 44 50.0
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 58.2 74 43.2
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 58.2 57 47.4
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 58.2 78 42.3
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 58.2 78 42.3
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 58.2 78 43.6
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 1.0e-06 57.8 47 51.1
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 1.0e-06 57.8 71 38.0
CiPaw.08G134400 Carya illinoinensis HOM05D015495 ORTHO05D024749 1.3e-06 57.4 77 41.6
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.4 78 42.3
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.4 78 42.3
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-06 57.0 74 41.9
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-06 57.0 74 43.2
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 2.3e-06 56.6 67 41.8
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 56.2 49 49.0
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 56.2 72 41.7
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 56.2 49 49.0
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 56.2 49 49.0
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 56.2 49 49.0
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 56.2 49 49.0
CiPaw.05G156600 Carya illinoinensis HOM05D015495 ORTHO05D024749 3.9e-06 55.8 94 38.3
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 3.9e-06 55.8 66 42.4
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 3.9e-06 55.8 75 45.3
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-06 55.5 75 42.7
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 5.1e-06 55.5 67 41.8
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 5.1e-06 55.5 67 43.3
CiPaw.16G028500 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.7e-06 55.1 69 43.5
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-06 55.1 76 42.1
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-06 55.1 73 41.1
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.7e-06 55.1 71 39.4
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 6.7e-06 55.1 67 41.8
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 8.7e-06 54.7 60 46.7
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 8.7e-06 54.7 45 51.1
Rhsim02G0156200 Rhododendron simsii HOM05D020684 ORTHO05D000309 8.7e-06 54.7 41 53.7


User provided reference genes

Program Settings